Gene Information

Name : Atc_0310 (Atc_0310)
Accession : YP_004747661.1
Strain : Acidithiobacillus caldus SM-1
Genome accession: NC_015850
Putative virulence/resistance : Unknown
Product : Homoserine dehydrogenase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0460
EC number : -
Position : 329532 - 330857 bp
Length : 1326 bp
Strand : +
Note : -

DNA sequence :
ATGGCGTTGGATACCGCCCCGGTGCGCGTTGGCATCCTGGGCATGGGGACGGTTGGGCAGGGCACGGTGCGCGTTCTGCA
GCGCAATGCCGACGAAATTCGCCGGCGGGTGGGACGGGAGCTGCGGATCTGTCACGCGGCGGTGCGCAAGCCCGAGCGTC
TGCACGGTCTGGAGTTGGATGCCCGCGTCAGCGCCGATCCTTGGGCGGTAGTACGCGATCCCGACATCGACGTGGTCGTC
GAGGTCATGGGCGGCATCGATCCCGCCCGCGCGCTGACTCTAGCGGCCCTGGAGAGCGGCAAGCACGTGGTGACCGCCAA
CAAGGCGCTGCTGGCCTTGCACGGCAACGAGATCTTTGCGGCGGCCCAGGCGCGCGGGCTAATGGTGGCCTTCGAGGCGG
CGGTGGCCGGTGCCATTCCCATTGTCAAGACCATCCGCGAGGGCCTTGCCGGTAATCGTATCCAGTCCCTCATGGGCATC
ATCAACGGCACCAGCAACTACATACTGACGCAGATGTATCGGGAGTCCTGGGATTTCGAGCGGGCGCTCGCAGCCGCTCA
GGAGCTCGGTTACGCCGAGGCGGACCCAAGCCTCGATGTGGACGGTGGTGACGCGGCGCACAAGATCACCCTCATGGCCT
CGGTGGCCTTTGGCATCCCGGTGGATTTTGCCCACTGTCACGTCGAAGGCATCCGCCACCTGCAGCGACAGGACGTGGCC
TTTGCAGCGGAGTTGGGTTACCGCATCAAGCTCCTGGGTATTACCCGGCGGTGTGACGACGGGGTGGAGTTGCGGGTGCA
CCCCACCCTCATCCCCGCCAGCCACCTGCTTGCCAGCGTCGAGGGTCCCTTCAACGCCATTCTGGTGCATAGCGATGCAG
CCGGACAGAGTATCTGCTACGGTCGTGGTGCCGGTGGCGACCCCACGGCCAGTGCCGTGGTCGCCGATCTGGTGGATGTC
GCCCGCACCATGACTGCCGACCCCAGTAATCGGGTACCGCACCTCGCCTTTCAGGCCGATGCCCTCACTGCTTTGCCCCT
GCTGCCCATGGCCGCCGTGGAGAGCGCCTATTACCTGCGCATCGAAGCCGCAAACCGGCCCGGCGTACTGGCGCAGGTGG
CGGCGGTACTGGCCGCCCATGGGGTGTCCATCGAGGCCCTCATCCAACGCGAGCGCCTTGGCGCCGAGACGGTGCCCATC
GTCCTGGTGCTGCACCGCTGCCGCGAGGCGGACCTCGATGCCGCCCTGGTACAGATGGCCCAGTTGCCGGTGATCGGTGG
TGAGGTCCTGCGTCTGCGCATAGAAAACATCGACCAGCAAGGCTAG

Protein sequence :
MALDTAPVRVGILGMGTVGQGTVRVLQRNADEIRRRVGRELRICHAAVRKPERLHGLELDARVSADPWAVVRDPDIDVVV
EVMGGIDPARALTLAALESGKHVVTANKALLALHGNEIFAAAQARGLMVAFEAAVAGAIPIVKTIREGLAGNRIQSLMGI
INGTSNYILTQMYRESWDFERALAAAQELGYAEADPSLDVDGGDAAHKITLMASVAFGIPVDFAHCHVEGIRHLQRQDVA
FAAELGYRIKLLGITRRCDDGVELRVHPTLIPASHLLASVEGPFNAILVHSDAAGQSICYGRGAGGDPTASAVVADLVDV
ARTMTADPSNRVPHLAFQADALTALPLLPMAAVESAYYLRIEAANRPGVLAQVAAVLAAHGVSIEALIQRERLGAETVPI
VLVLHRCREADLDAALVQMAQLPVIGGEVLRLRIENIDQQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00305 YP_008207770.1 Homoserine dehydrogenase Not tested AbaR25 Protein 1e-93 53
BJAB0868_00309 YP_008211635.1 Homoserine dehydrogenase Not tested AbaR26 Protein 1e-93 53