|
Name : Atc_2591 (Atc_2591) Accession : YP_004749940.1 Strain : Acidithiobacillus caldus SM-1 Genome accession: NC_015850 Putative virulence/resistance : Unknown Product : tmRNA-binding protein SmpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 2645028 - 2645489 bp Length : 462 bp Strand : + Note : - DNA sequence : ATGAGCAGCACCATCGCCCTCAACCGTGAGGCGAAACACGAGTATTTCATCGAAGAGCGTTTCGAGGCCGGCATCGCCCT GGAAGGCTGGGAGGTGAAGTCCCTGCGGGCCGGGCGTCTGAACCTCAAAGACAGCTATGTGGTGGTGAAGCAGGGTGAGC TGTGGCTCTTAGGCGCGCACATCAGCCCCTTGACCACCGCCAGCACCCACATCCATCCGGATCCGACGCGCACGCGCAAA CTCCTCATGCATCGGCTGGAAATCAATCGCCTCATCGGTGCCATCGAACGCAAGGGCTACACCGTGGTGCCTCTGGCAAT GTACTGGAAGGCGGGACGCGCCAAGGTCGAGATTGCACTCGTCAAGGGTAAACAGGCCCACGACAAGCGCGCCAGCATCA AAGAGCGGGAATGGCAGCGGGACAAGGCGCGGATCCTGAAAGGGGGCGGCCGTGAGCTCTGA Protein sequence : MSSTIALNREAKHEYFIEERFEAGIALEGWEVKSLRAGRLNLKDSYVVVKQGELWLLGAHISPLTTASTHIHPDPTRTRK LLMHRLEINRLIGAIERKGYTVVPLAMYWKAGRAKVEIALVKGKQAHDKRASIKEREWQRDKARILKGGGREL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 2e-37 | 53 |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 4e-26 | 47 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 5e-24 | 44 |
