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Name : Atc_2474 (Atc_2474) Accession : YP_004749823.1 Strain : Acidithiobacillus caldus SM-1 Genome accession: NC_015850 Putative virulence/resistance : Unknown Product : Seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 2535019 - 2536287 bp Length : 1269 bp Strand : - Note : - DNA sequence : ATGCTCGACCCCAACCTGTTGCGTACCCAGCCCGAGCTCGTGGCCGCGGGACTCGCCCGTCGTGGCTTCACTCTGGATCT GGCCTTGCTGCGCCATCTGGATGATCGGCGCAAGGCCTTGCAGGTAGAACTGGAAAACCTGCGCAACGAACGCAACCGCC TGTCCAAGGCCGTCGGGATGGCCAAGCGCAGCGGCGAGGATGCCCTTGCCCTGCAGGGTGAGGCCACGGCCGTTTCCGCG CGCATCGCCACCGTCGAGGAGGATCAGCGCGCCGCCCTTGCCGCCTGGGACACCTTTGTACAGACCCTTCCCAACCTCCC GGACGCCGAAGTTCCCGATGGTCGCGACGAGAACGACAACGTCGAGTTACGCCGCTGGGGCGAGCCCAGGACCTTCGATT TTGCGGTCCGCGACCACGTCGACATTGCCGAGCAACTGGGCATGGCGGATTTTGCTGCCGGCGCCAGACTCGCTGGCAGC CGCTTCGTCGTGCTCAAGGGTTTCGGTGCACGTCTCGAGCGCGCACTCATCCAGTTCATGCTGGACGTCCAGACCCAAGA GCACGGATATCTGGAGATCGCCCCCCCCTATCTTGCCAATGCCGCCTCCCTCTTCGGCACCGGCCAGTTGCCCAAGTTCG AGGAAGACCTCTTCGCCCTACGCGACGACCCCTATTACCTCATCCCCACGGCCGAGGTTCCCCTCACCAACTTGCTGCGG GAAAGCATTGTCGAGACGCTGCCCCAGCGATTCTGCGCCTATACCCCCTGCTTTCGGCGAGAGGCGGGCGCCGCCGGGCG GGATACCCGCGGCATGATCCGCCAGCACCAGTTCGACAAGGTCGAGATCGTCCAGATCGTCCGTCCGGACGCTTCCGCCG CCGCTCACGAGGAACTGACGGCCCATGCCGAGTCGATCCTGCAGCGCCTGGAGCTCCCGTATCGGGTGGTGGCCCTCTGC GCCGGCGACCTCGGTTTCAGTGCCGCCAAGACCTACGACCTGGAGGTCTGGCTTCCCAGTCAAGGGATGTATCGGGAGAT CAGCTCCTGCAGCAACTTCGGCAGTTTTCAAGCACGTCGCTTGCAGCTTCGCTACCGCAAGGACGACGGTCGTCCGGAGC TCGCCCATACCCTCAATGGCTCCGGTCTGGCCGTGGGTCGCACCCTGGTCGCCCTGCTGGAGAACCACCAGCAGGCCGAT GGCAGCCTGCGTGTGCCGGCGGCTTTGCGTCCCTATCTCGGCGGCGTGGAGGTCATTCGTGGCCAGTGA Protein sequence : MLDPNLLRTQPELVAAGLARRGFTLDLALLRHLDDRRKALQVELENLRNERNRLSKAVGMAKRSGEDALALQGEATAVSA RIATVEEDQRAALAAWDTFVQTLPNLPDAEVPDGRDENDNVELRRWGEPRTFDFAVRDHVDIAEQLGMADFAAGARLAGS RFVVLKGFGARLERALIQFMLDVQTQEHGYLEIAPPYLANAASLFGTGQLPKFEEDLFALRDDPYYLIPTAEVPLTNLLR ESIVETLPQRFCAYTPCFRREAGAAGRDTRGMIRQHQFDKVEIVQIVRPDASAAAHEELTAHAESILQRLELPYRVVALC AGDLGFSAAKTYDLEVWLPSQGMYREISSCSNFGSFQARRLQLRYRKDDGRPELAHTLNGSGLAVGRTLVALLENHQQAD GSLRVPAALRPYLGGVEVIRGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-92 | 57 |
