|
Name : Atc_2104 (Atc_2104) Accession : YP_004749454.1 Strain : Acidithiobacillus caldus SM-1 Genome accession: NC_015850 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 2147682 - 2149223 bp Length : 1542 bp Strand : + Note : - DNA sequence : ATGCCCACACCGAGGATGACCATGAAAGCGATTATCGAGATCCTGCGATTACACGCTGCCGGCTGTAGTCAGCGGCAAAT TGCCCGGGCCTGCGGGCTGTCCAAGGGAACGGTAGGCAAGTATCTGCAACGGGCGGCGGAAGCCCAGATCGGTTGGCCCC TGCCCGATGGGCTGACGGTTATGGAGGTAGAACAGCGGCTGAACCCACGCCGCCAACCGCCTCCAGCATCCCGACCGGTC CTGCCCGATTGGGCGCAGATCCATACGGAGTTGCGGCGCAAGGGCGTGACCCTGCAACTGCTCTGGGAAGAGTATGTGGC CGCCCACCCGGACGAGCGCACCTATCAGTATGCACAGTTCTGTGTGCATTACCGCAGCTGGAAAGGCCGCCTCAAAACCA GTATGCGGCAACAGCATGTGGCGGGCGAAAAACTCTTCATTGATTATGCCGGGCCGACGGTAGCAGTCGTGGACTCGGGC ACCGGTGAGATCCGGCAGGCCCAGATTTTTGTGGCGGTGCTGGGAGCTTCCAGCTATACCTACTGCGAGGCCACCTGGAG CCAGAGTCTGCCAGACTTCCTGGGTGCCCATGTCCGGGCGTTCCGGTACTTCGGCGGAGTACCGACTCTCCTGGTCCCCG ACAATCTCAAGGCGGCGGTCACCAGGGCCTCTCGCTATGAGCCCGAGATCAACCGCAGCTATCGGGATCTGGCCTCTCAT TACGGGGCCGTGGTGCTGCCGACACGCCCCTATAAACCCAAAGACAAGGCCAAGGTCGAAGTCGGTGTGCAAGTGGTGGA GCGCTGGATTCTGGCGCGGTTGCGGCACTGCCAGTTCTTCTCGCTGATGGAGCTCAACCGGGAGATCCGCCGCCTGCTGG AGGACCTCAATCAACGGCCCTTCAAGGTCCTGCCCGGCAGCCGCCAAAGCACCTTTGAATCCCTGGAGCAACCCGCCCTG CAGCCCTTGCCCGCACAGGACTATGTGTACGCACTCTGGAAAAGCGCCAAGGTCAGCATCGACTCCCATGTGGCCTATCA GGGGCATTTTTACTCGGTGCCCTATCGTCTGGTCGGCACCTGGGTCGATCTGCGGGTCAGTGCCCGGACGGTGGAAATCT TCCACCAGCAGCAGCGCATCGCCAGCCATCCCCGCCAGACCCTGCAGGGGCGCTATAGCACCATCCCGGAACACCTGCCC AAGGCTTATCAGCAACACCGGGAATGGTCTCCGGGACGGCTCCTGAATTGGGCCCTGTCCATTGGACCGGCTACCCGGGA CGTGGTGCGCTGGCAACTGGCGCGACGTGCCCATCCCGAACAAGGCTACCGGTCCTGTCTGGGTCTGCTCAGTTACTCCC GGCGCTATGGCCAGGAACGCCTCGATGCCGCCTGTGCCCGGGCGCTGAAGATTGGTTCACCGACCACCCAGAGCATCCAG TCCATCCTGAAGCAGGGGATGGATCAGGTCCAGGAGCCCGCCTCCCCAAGCACCCCCTTACCGACCCACGCCAATATCCG TGGACCCCGCTACTACCAATGA Protein sequence : MPTPRMTMKAIIEILRLHAAGCSQRQIARACGLSKGTVGKYLQRAAEAQIGWPLPDGLTVMEVEQRLNPRRQPPPASRPV LPDWAQIHTELRRKGVTLQLLWEEYVAAHPDERTYQYAQFCVHYRSWKGRLKTSMRQQHVAGEKLFIDYAGPTVAVVDSG TGEIRQAQIFVAVLGASSYTYCEATWSQSLPDFLGAHVRAFRYFGGVPTLLVPDNLKAAVTRASRYEPEINRSYRDLASH YGAVVLPTRPYKPKDKAKVEVGVQVVERWILARLRHCQFFSLMELNREIRRLLEDLNQRPFKVLPGSRQSTFESLEQPAL QPLPAQDYVYALWKSAKVSIDSHVAYQGHFYSVPYRLVGTWVDLRVSARTVEIFHQQQRIASHPRQTLQGRYSTIPEHLP KAYQQHREWSPGRLLNWALSIGPATRDVVRWQLARRAHPEQGYRSCLGLLSYSRRYGQERLDAACARALKIGSPTTQSIQ SILKQGMDQVQEPASPSTPLPTHANIRGPRYYQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_3528 | YP_854247.1 | transposase for ISEc12 | Not tested | PAI I APEC-O1 | Protein | 7e-113 | 50 |
| unnamed | CAC39294.1 | hypothetical protein | Not tested | LPA | Protein | 9e-113 | 50 |
| ORF_6 | AAZ04417.1 | putative transposase subunit | Not tested | PAI I APEC-O1 | Protein | 5e-113 | 50 |
| VPI2_0005c | ACA01822.1 | IstA | Not tested | VPI-2 | Protein | 1e-117 | 50 |
