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Name : Atc_0168 (Atc_0168) Accession : YP_004747519.1 Strain : Acidithiobacillus caldus SM-1 Genome accession: NC_015850 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : - Position : 169180 - 171198 bp Length : 2019 bp Strand : + Note : - DNA sequence : TTGTTCATTGCCGAAAAGCCCTCCCTGGGCAAGGGGATAGCGAAGTATCTATCGGGTAGCGCATCCAGTGGCAAGGGCTA CATCCAATGCGGGCCGGACGTGGTGACCTGGTGCTTCGGCCATGTTTTTGAACAGGTGGAACCCGATTACTACCTGCCGG ACGACGTGCCCCTGGCAAACAACGGGAAGAAAAAATGGCGTTTTGAGGATTTGCCCATCTTCCCGGAGCACTGGAAACTG GAGGCCAAGGACGACGCCAAGGCCCAGATCAAGGTCATTCGGGATTTGCTCAAGAAGGCAGACGTCGTGGTCAACGCGGG CGACCCCGACCGCGAGGGGCAACTGCTGGTCGATGAGGTCCTGGAAGAATTGGGCTGGAAAGGCCCCACGCAAAGGATCT GGCTCGCCGCCCTCGATGAGCAGTCGGTAAAGAAGGCCCTCTCCAGCATCCGCGACAACCGGGAGTACCAGAATCTCTGC AATGCCGCCCGTGCCCGCTCACGGGCGGACTGGCTGGTGGGGATGAACCTCTCCCGCGCATTCACGCTAAGGAACAGCGG TGGGGGCGTGGTATCCATCGGGCGGGTACAGACGCCAACGCTAGCCCTGATCGTGGCGCGGGATGAGAAAATCGAGAACT TCCAGCCCAAGGAGTATTTCGTGCCCCGAATCCATACCGGATTCTGGTCCAGCTGGGAACTGCATGAGGACTTTTCCGGT GTCGATGGGGAGGGCTATCTGACCGATTGCAAGGCGGCAGATAGCCTCATCGCCAGGGCGCAGGCCGAAGGCCGGGCCGT TGTGCAGGAATACGAGTCCAGGGAGAAGCAGCAATCGGCTACCCTGGGCTTTTCGTTGGCCGAGCTCCAGAAGGTGTGCT CGGCCAAGCTCGGAATGTCCGCGCAGCAGGTGCTCGATGCCGCCCAGGCATTGTACGAAACCCATAAATGCGCAACCTAC CCGCGCACCGACTGCCGCTATCTGCCCGAAGAGCAGTTTGCCGAGGCCAGCCGGGTGCTCTCGGGTCTCGCGCGCCTGGG TTTTGGGGATCTCGTGAAAAACGCGGATGCGGCCCGTAAATCGTCCATCTGGAATACCGGCAAGGTAACGGCCCACCACG CGATCATCCCCACGGGGGGTATGGAAAGCCGGCCAGAGGGTGCCACGGCCAAGGTATACGAGATCATCGTCCGATCGTAC CTGGCACAGTTCTACCCCCCTTACGTCTTCCGGGCTATCAAGGCCGTTCTGGGCTGCGCGGGAGAGTCCTGGAAGGCAAC CGCCAATGTCCCGGTCGCTCCCGGCTGGAAAGCCGTCTATGGCCTGTCCGAAGAGGAGGGTGAAGCGGCGCAACAGCCTA TCCCTGTACTCCAGACAGGCCAGGTCCTGCCCGTCCAGGACGCGGATGTGCAGGCGAAGCAGACCAAGCCCCCGGCGCGA TTTACCGACGGTTCGCTCATCGAGGCCATGAGCAACATCCACAAATTCATCGAGGACGAGGCTGCCAAGGCCAAGCTCAA GGAAGCCTCTGGCCTGGGCACCGAGGCCACGCGGGCGTCCATTCTGGAAACCCTGCTGGGGCGCGGTTTTGTTGAGCGCA AGGGGAAGCAGTTGATCTCCACCAGGGCCGGGCGGGAACTGGTCAAGGCCCTGCCGAGGGAGTTGACCGATCCCGTCACA ACGGCCAAGTGGGAGGATGCGCTATCTCTGATTGCCGAAGGCAAGCTCACCCTGGAGCAGTTCGAGGAGGTGCAGCGCGC GGTGGTCGCCCGGCACATTGCAGCGGCGAAAAGCAGCCATTTCACGGTCGGGGAGGCCCGTTCCCGGAACGGTAAAGGTG CGGCGACGGGTAAGGCCAGAAAGCTGGGGCCAACCTGTGCTGCCTGCAAGCAATCCAAAACGGTAGTGCTCCGCGCCAAG AGCGGCAAGAACTGGCTCAAGTGCGAGGCCTGCGGGGCCGCGTTTTGGCCGGAGAAAAACGGCAAAGGCTGTGGGACACC ATGGGAGGCTCGGGCATGA Protein sequence : MFIAEKPSLGKGIAKYLSGSASSGKGYIQCGPDVVTWCFGHVFEQVEPDYYLPDDVPLANNGKKKWRFEDLPIFPEHWKL EAKDDAKAQIKVIRDLLKKADVVVNAGDPDREGQLLVDEVLEELGWKGPTQRIWLAALDEQSVKKALSSIRDNREYQNLC NAARARSRADWLVGMNLSRAFTLRNSGGGVVSIGRVQTPTLALIVARDEKIENFQPKEYFVPRIHTGFWSSWELHEDFSG VDGEGYLTDCKAADSLIARAQAEGRAVVQEYESREKQQSATLGFSLAELQKVCSAKLGMSAQQVLDAAQALYETHKCATY PRTDCRYLPEEQFAEASRVLSGLARLGFGDLVKNADAARKSSIWNTGKVTAHHAIIPTGGMESRPEGATAKVYEIIVRSY LAQFYPPYVFRAIKAVLGCAGESWKATANVPVAPGWKAVYGLSEEEGEAAQQPIPVLQTGQVLPVQDADVQAKQTKPPAR FTDGSLIEAMSNIHKFIEDEAAKAKLKEASGLGTEATRASILETLLGRGFVERKGKQLISTRAGRELVKALPRELTDPVT TAKWEDALSLIAEGKLTLEQFEEVQRAVVARHIAAAKSSHFTVGEARSRNGKGAATGKARKLGPTCAACKQSKTVVLRAK SGKNWLKCEACGAAFWPEKNGKGCGTPWEARA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 9e-99 | 41 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 9e-99 | 41 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 6e-99 | 41 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 1e-96 | 41 |
