|
Name : Atc_1600 (Atc_1600) Accession : YP_004748949.1 Strain : Acidithiobacillus caldus SM-1 Genome accession: NC_015850 Putative virulence/resistance : Unknown Product : ISPsy2, transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3039 EC number : - Position : 1646412 - 1647368 bp Length : 957 bp Strand : - Note : - DNA sequence : ATGTCCGGACAGATAACCTTTGCCGAGGAGCCCAGCCTGTCGCGACGCCGCAAGCAGACCAAGCGAGAACGCTTTCTGGC CGAGATGGATGCCGTGGTTCCCTGGGCCAGGCTTGTGGCCTTGATCGAGCCGCACTACCCCAAGGGGGGCAGCGGCCGCA AACCTATGCCTTTGGAGCGGATGCTGCGGATCCACTTTCTCCAGCAATGGTTCGGCTACTCCGATCCGGGGATGGAAGAG GCCCTGTACGAGGTTCCTCTGCTCCGTCAATTCGTCGGTATCGACTTGGGTCGGGACTTCGTTCCCGATGAGACCACGAT CCTGAAGTTCCGCCGCTTACTGGAGCGCCATGCGCTTGCCCAGGCCATCTTTGCCGAGGTGCAGTCCGTGTTGCAGGAGA AAGGGCTCTTGCTGCAGGAAGGCAAGACCGTGGATGCCACCTTGATTCACGCCCCGAGCTCCACCAAGAACCGAGACCGC AAGCGGGATCCAGAGATGAGTTCCACCAAGAAAGGGAATCAGTGGTATTTCGGGATGAAGGCGCATGTGGCAACGGATCT CCAAGGTATCGTACAGGCGGTGGACTTCACGGCGGCCAAGGTACCGGATCATCAGCGGCTGGAGGGGCTCCTTACCGGAG AGGAGTCGGTGGTCCTCGCTGACCGGGGCTATGACTATCCCCGGGTGCATGACACGCTGGTGGCCCGAGGCATACGGAAC GCGGTAGCGCGGCGACGCTATCCTGGGCAGAAAACCGGCTTGGCGGCCCTCAAGCGCTACAACCGCGCCATTGCCCGGAT CCGTGCCCGGGGAGAACACGCCTTCCGGGTGCTGAAGTGCCAATTCGGTTATCAGCGAACCAGATATCGGGGTCTGGCCA AGAACGGTGCTCAACTGACCACGCTCTTTGCCTTGGCCAATCTGTACATGCTGAGGAGATATCTCCTGGCCGCGTAG Protein sequence : MSGQITFAEEPSLSRRRKQTKRERFLAEMDAVVPWARLVALIEPHYPKGGSGRKPMPLERMLRIHFLQQWFGYSDPGMEE ALYEVPLLRQFVGIDLGRDFVPDETTILKFRRLLERHALAQAIFAEVQSVLQEKGLLLQEGKTVDATLIHAPSSTKNRDR KRDPEMSSTKKGNQWYFGMKAHVATDLQGIVQAVDFTAAKVPDHQRLEGLLTGEESVVLADRGYDYPRVHDTLVARGIRN AVARRRYPGQKTGLAALKRYNRAIARIRARGEHAFRVLKCQFGYQRTRYRGLAKNGAQLTTLFALANLYMLRRYLLAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp-33 | AAN62255.1 | transposase | Not tested | PAGI-3(SG) | Protein | 7e-74 | 56 |
| tnpA | AAF71487.1 | TnpA | Not tested | Hrp PAI | Protein | 2e-54 | 52 |
| PSPTO_1407 | YP_003355052.1 | ISPssy transposase or derivative | Not tested | Hrp PAI | Protein | 2e-54 | 52 |
| unnamed | AAO33449.1 | putative transposase | Not tested | Not named | Protein | 5e-48 | 48 |
| tnpA | ACF06175.1 | putative transposase | Not tested | Tn5036-like | Protein | 1e-50 | 44 |
| tnpA | ACF06178.1 | putative transposase | Not tested | Tn5036-like | Protein | 1e-50 | 44 |
