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Name : Atc_1493 (Atc_1493) Accession : YP_004748842.1 Strain : Acidithiobacillus caldus SM-1 Genome accession: NC_015850 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein fliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 1530976 - 1531647 bp Length : 672 bp Strand : + Note : - DNA sequence : TTGCCCGCATTGACGGCAAGTCCCGCGCCGGGTGGCGGTACCGAGTACAGTCTCAGCATTCAGACGCTGCTCTTCATGAC GGTGCTGGTCTTCCTGCCGGCACTGCTGCTGATGATGACGGCGTTTACGCGCATCATCATCGTCCTGTCGCTGCTCAAAC AGGCCTTGGGATCGACCCAGATGCCCCCGAGCCAGGTCATGGTGGGACTGGCCCTTTTCCTGACATTCTTTGTGATGGCT CCGGTGTTCCAGCAGATCAATACGGAGGCCTTGCAACCCCTCAACGATAATAAAATCGACCTGGTACAGGCGATGGCCAA GGCAGAGGGACCCTTGCGCAACTTTATGCTCTCGCAGACCCGTCCCGATGATCTCGCCCTCTTCGTGAAACTCTCCGGCC ACAAGGCTCTGGAAAAACCCAGCGATACCCCTCTGAGTCTGTTGGTGCCAGCGTTTATTACTTCCGAGCTGAAAACCGGA TTTCAGATAGGTTTCCTGATATTCATTCCCTTCGTCATCATCGATCTCGTGGTAGCAGCGGTGCTCATGTCCCTGGGCAT GATGATGCTGTCTCCGGTGACCGTATCCTTCCCGTTGAAACTCATGCTGTTTGTATTGGTGGACGGCTGGGATCTGGTCA TCGGTTCCCTGGTTCAGAGCTTTGTCCACTGA Protein sequence : MPALTASPAPGGGTEYSLSIQTLLFMTVLVFLPALLLMMTAFTRIIIVLSLLKQALGSTQMPPSQVMVGLALFLTFFVMA PVFQQINTEALQPLNDNKIDLVQAMAKAEGPLRNFMLSQTRPDDLALFVKLSGHKALEKPSDTPLSLLVPAFITSELKTG FQIGFLIFIPFVIIDLVVAAVLMSLGMMMLSPVTVSFPLKLMLFVLVDGWDLVIGSLVQSFVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 5e-33 | 42 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 5e-30 | 42 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 5e-30 | 42 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 5e-30 | 42 |
| hrpW | AAB05075.1 | HrpW | Virulence | Hrp PAI | Protein | 1e-24 | 42 |
| hrcR | ABQ88359.1 | HrcR | Virulence | Hrp PAI | Protein | 1e-24 | 42 |
| hrcR | NP_791222.3 | type III secretion protein HrcR | Virulence | Hrp PAI | Protein | 2e-25 | 42 |
| hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 2e-25 | 42 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 8e-31 | 41 |
| hrcR | AAG33884.1 | HrcR | Virulence | Hrp PAI | Protein | 6e-27 | 41 |
| hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 3e-25 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Atc_1493 | YP_004748842.1 | flagellar biosynthesis protein fliP | VFG2494 | Protein | 2e-69 | 64 |
| Atc_1493 | YP_004748842.1 | flagellar biosynthesis protein fliP | VFG1259 | Protein | 1e-65 | 61 |
| Atc_1493 | YP_004748842.1 | flagellar biosynthesis protein fliP | VFG2338 | Protein | 2e-66 | 60 |
| Atc_1493 | YP_004748842.1 | flagellar biosynthesis protein fliP | VFG2016 | Protein | 9e-63 | 57 |
| Atc_1493 | YP_004748842.1 | flagellar biosynthesis protein fliP | VFG0044 | Protein | 7e-37 | 43 |
