Gene Information

Name : Atc_1152 (Atc_1152)
Accession : YP_004748501.1
Strain : Acidithiobacillus caldus SM-1
Genome accession: NC_015850
Putative virulence/resistance : Virulence
Product : Single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1159046 - 1159552 bp
Length : 507 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTGGTGTGAACAAGGTGATTTTGTTGGGGTACCTGGGCGCTGACCCGGAAATGCGGTACATGCCCGATGGTACGGC
AGTGGCCAATCTTTCCATTGCCACATCGGAGTCCTACAAGGACAAGGAGGGGAATCGGCAGGAGCGCACGGAATGGCATC
GTGTATCTCTGTACCGTCGTCAGGCTGAGGTTGCCGGAGAGTATCTCAAGAAGGGCAGCATGGCCTACGTCGAGGGCCGT
CTCCGTACCCGGAAATGGACCGACAAAGAGGGCCAGGAGCGCTATACTACCGAGATCGTCGGCGATCGTTTTCAGATGGT
TGGCAGTCGCCGGGACAGGGACGGTCAGGAATCCGCGAACGGCGGTTCCAAGAATGGCCGTCCGGCTTCCAAGGGCTCTG
GTGGTGGTGCCAACATGGATGTACCGCCGGAGGATTTTGACGACGAGATTCCGTTCGCGATCGCTGCGGATATCGCGCGT
CGAGGATTGCGGCGGGTTCGGTTCTGA

Protein sequence : 
MSGVNKVILLGYLGADPEMRYMPDGTAVANLSIATSESYKDKEGNRQERTEWHRVSLYRRQAEVAGEYLKKGSMAYVEGR
LRTRKWTDKEGQERYTTEIVGDRFQMVGSRRDRDGQESANGGSKNGRPASKGSGGGANMDVPPEDFDDEIPFAIAADIAR
RGLRRVRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 7e-36 55
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 2e-34 52
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 2e-34 52
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 1e-34 52
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 6e-23 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Atc_1152 YP_004748501.1 Single-stranded DNA-binding protein VFG0576 Protein 9e-31 50