Gene Information

Name : Atc_0107 (Atc_0107)
Accession : YP_004747458.1
Strain : Acidithiobacillus caldus SM-1
Genome accession: NC_015850
Putative virulence/resistance : Unknown
Product : ISPsy2, transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3039
EC number : -
Position : 115486 - 116442 bp
Length : 957 bp
Strand : -
Note : -

DNA sequence :
ATGACCGGACAGATGACCTTTGCCGAGGAGCCCAGCCTGTCGCGACGCCGCAAGCAGACCAAGCGAGAACGCTTTCTGGC
CGAGATGGATGCCGTGGTTCCCTGGGCCAGGCTTGTGGCCTTGATCGAGCCGCACTATCCCAAGGGTGGCAGTGGCCGCA
AGCCCATGCCCTTGGAGCGGATGCTGCGTATCCACTTTCTCCAGCAATGGTTCGGCTACTCCGATCCGGGGATGGAAGAG
GCCCTGTACGAGGTTCCCCTGCTCCGTCAATTCGTCGGTATCGACCTGGGCCGGGACTTCGTTCCTGACGAGACCACGAT
CCTGAAGTTCCGCCGCTTACTGGAGCGCCATGCGCTTGCCCAGGCCATCTTTGCCGAGGTGCAGGCGGTGTTGCGGGAGA
AAGGGCTCTTTCTGCAGGAGGGCAAGACCGTGGATGCCACCTTGATTCACGCCCCGAGCTCCACCAAGAACCGAGACCGC
CAGCGGGATCCGGAGATGAGCTCCACCAAGAAAGGGAATCAGTGGTATTTCGGGATGAAGGCGCATGTGGCAACGGATCT
CCAAGGTATCGTACAGGCGGTGGACTTCACCGCGGCCAAGGTACCGGATCATCAGCGGCTGGAGGGGCTCCTTACCGGAG
AGGAGTCGGTGGTCCTCGCTGACCGGGGCTATGACTATCCCCAGGTGCATGACACGCTGGTGGCCCGAGGCATACGGAAC
GCGGTAGCGCGGCGACGCTATCCTGGGCAGAAAACCGGCTTGGCGGCCCTCAAGCGCTACAACCGCGCCATTGCCCGGAT
CCGTGCCCGGGGAGAACACGCCTTCCGGGTGCTGAAGTGCCAATTCGGTTATCAGCGAACCAGATATCGGGGTCTGGCCA
AGAACGGTGCTCAACTGACCACGCTCTTTGCCTTGGCCAATCTGTACATGCTGAGGAGATATCTCCTGGCCGCGTAG

Protein sequence :
MTGQMTFAEEPSLSRRRKQTKRERFLAEMDAVVPWARLVALIEPHYPKGGSGRKPMPLERMLRIHFLQQWFGYSDPGMEE
ALYEVPLLRQFVGIDLGRDFVPDETTILKFRRLLERHALAQAIFAEVQAVLREKGLFLQEGKTVDATLIHAPSSTKNRDR
QRDPEMSSTKKGNQWYFGMKAHVATDLQGIVQAVDFTAAKVPDHQRLEGLLTGEESVVLADRGYDYPQVHDTLVARGIRN
AVARRRYPGQKTGLAALKRYNRAIARIRARGEHAFRVLKCQFGYQRTRYRGLAKNGAQLTTLFALANLYMLRRYLLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp-33 AAN62255.1 transposase Not tested PAGI-3(SG) Protein 4e-74 56
PSPTO_1407 YP_003355052.1 ISPssy transposase or derivative Not tested Hrp PAI Protein 9e-54 51
tnpA AAF71487.1 TnpA Not tested Hrp PAI Protein 7e-54 51
unnamed AAO33449.1 putative transposase Not tested Not named Protein 4e-47 47
tnpA ACF06175.1 putative transposase Not tested Tn5036-like Protein 3e-51 45
tnpA ACF06178.1 putative transposase Not tested Tn5036-like Protein 3e-51 45