Gene Information

Name : GYY_03285 (GYY_03285)
Accession : YP_004742279.1
Strain : Methanococcus maripaludis X1
Genome accession: NC_015847
Putative virulence/resistance : Virulence
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 613612 - 614337 bp
Length : 726 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGACATTAATTGAAGCAAAAAATGTAATCAAGACTTACGGAGTTGGCGAAGCTAAATCCAACGTTTTAAAAGGGGTTAA
TTTAAAAATTGAAGAAGGAGAATTTGTAATGATAATGGGCCCGAGTGGTTGTGGAAAATCTACTTTAATGAATATTTTGG
GTCTTTTAGACGTTCCTTCCAAAGGCGATGTTTACATAAAAGATAAAAAAACCACGAAAATGAACGAAAATGAACGTGCA
GTATTTAGGAGAAAGATTAGTGGGTTTATATTCCAACAATTCCATTTAATCGGGACATTAACTGCTTTAGGAAATGTTGA
ACTTCCTATGACCCTGGATGGAAAAGAAGAAACTTTCAGGCAAAAACGAGCTAAAGAATTATTGAATATCGTAGGGCTTA
GTGAAAGAGAAAATTATAAGCCATCGCAACTTTCAGGTGGACAGCAGCAAAGGGTTGCAATTGCAAGATCTCTTTCAAAT
AATCCAAAACTACTGTTTGCAGATGAGCCTACTGGAAATCTTGACAGTAAAAGTGGTAAACAGGTAATGGAAATACTTGA
GAACTTACACAACGAAGGAATGACGATTGTAATGGTTACTCACGATAGCTATATGATAAAATACGCTACAAAGGTTATTC
GGATGAAAGATGGGGAAATTCTCGAAATCGATAAGGTTAAAGATGGAGAAGTTGTTGAAACCGAAGTAGTTAAAAAAGAT
GTATAG

Protein sequence : 
MTLIEAKNVIKTYGVGEAKSNVLKGVNLKIEEGEFVMIMGPSGCGKSTLMNILGLLDVPSKGDVYIKDKKTTKMNENERA
VFRRKISGFIFQQFHLIGTLTALGNVELPMTLDGKEETFRQKRAKELLNIVGLSERENYKPSQLSGGQQQRVAIARSLSN
NPKLLFADEPTGNLDSKSGKQVMEILENLHNEGMTIVMVTHDSYMIKYATKVIRMKDGEILEIDKVKDGEVVETEVVKKD
V

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-37 48
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-38 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-38 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-38 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYY_03285 YP_004742279.1 ABC transporter ATPase NC_012469.1.7686878. Protein 5e-50 50
GYY_03285 YP_004742279.1 ABC transporter ATPase CP001581.1.gene798.p Protein 7e-42 46
GYY_03285 YP_004742279.1 ABC transporter ATPase NC_008702.1.4606598. Protein 2e-40 45
GYY_03285 YP_004742279.1 ABC transporter ATPase CP001581.1.gene598.p Protein 1e-39 42
GYY_03285 YP_004742279.1 ABC transporter ATPase NC_012469.1.7685735. Protein 4e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYY_03285 YP_004742279.1 ABC transporter ATPase VFG0869 Protein 1e-23 41