Gene Information

Name : GYY_02900 (GYY_02900)
Accession : YP_004742202.1
Strain : Methanococcus maripaludis X1
Genome accession: NC_015847
Putative virulence/resistance : Virulence
Product : helix-turn-helix DNA binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 547951 - 548154 bp
Length : 204 bp
Strand : +
Note : COG1476 Predicted transcriptional regulators

DNA sequence :
ATGAAAAACAAAATTAAAGTATTTAGAGCAATGCACAATTTAACTCAGGAAAATCTTGCAAAAAAGTTAAATGTGACACG
TCAGACAATTATTGCAATTGAAAAAGAAAAATACGACCCCTCCCTTGAATTGGCCTTTAAAATTGCAGAATTATTTGAAG
CAAAAATTGAAGATGTATTTATTTATGAATCTACTCAAAAATAA

Protein sequence :
MKNKIKVFRAMHNLTQENLAKKLNVTRQTIIAIEKEKYDPSLELAFKIAELFEAKIEDVFIYESTQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 5e-13 52
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 6e-09 46
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 9e-09 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYY_02900 YP_004742202.1 helix-turn-helix DNA binding protein VFG2168 Protein 3e-09 46
GYY_02900 YP_004742202.1 helix-turn-helix DNA binding protein VFG2175 Protein 3e-09 46