Gene Information

Name : GYY_00525 (GYY_00525)
Accession : YP_004741738.1
Strain : Methanococcus maripaludis X1
Genome accession: NC_015847
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 106618 - 107517 bp
Length : 900 bp
Strand : +
Note : COG0214 Pyridoxine biosynthesis enzyme

DNA sequence :
ATGAAAAAATTAGGAACAGACCTTTTAAAAAGAGGATTTGCGAAAATGGTAAAACACGGGGTTGTAATGGATGTTACAAA
CGTGGAACAGGCATTGATTGCAGAAGAAGCAGGTGCTACTGCTGTAATGGCTTTAGAAAGAGTTCCTGCTGACATTAGGG
TACAGGGCGGCGTTGCAAGAATGTCTGACCCAGAAATGATTTTAGAGATTAAAGACGCAGTATCAATTCCAGTAATGGCA
AAAGCAAGAATTGGACACTATGTAGAAGCTCAAGTGTTAGAATCAATCGGTGTTGACATGGTTGACGAGAGTGAAGTTTT
AACTCCTGCTGATGAAGTAAATCACATCGACAAACGAGCATTTACAGCACCATTTGTTTGCGGTGCAAGAAACTTGGGCG
AAGCCTTGAGAAGGATCGATGAAGGAGCAGCAATGATTAGGACCAAAGGGGAAGCTGGAACTGGAAACGTTGTTGAAGCT
GTAAAACACATGAGAGCAGTTAACGAAGGAATTGCAAGAGTTATCGGATACAAAGAAATGGGCCTTGAAGCAGAATTAAT
TCAAATGGCAAGAAATGAATTGAAAGTTCCAATGGAGCTTATTTCAGAAGTTGCAGAACTTAAAAGACTTCCTGTTGTAA
ACTTTGCAGCTGGTGGAATTGCAACACCTGCAGATGCAGCTTTAATGATGCAGATGGGATGTGACGGAGTATTTGTGGGC
TCTGGAATCTTTAAATCAGGAAATCCTGCAGTAAGGGCAAAAGCAATCGTTGAAGCAACATATAACTTCGACAAACCAGA
AGTAATAGCAGAAGTAAGCAAAAATTTAGGAGAAGCAATGGTTGGAATTAATATCGATGAAATTCCAGAAGAAATGCTTC
TTGCAAAAAGAGGAATTTAA

Protein sequence :
MKKLGTDLLKRGFAKMVKHGVVMDVTNVEQALIAEEAGATAVMALERVPADIRVQGGVARMSDPEMILEIKDAVSIPVMA
KARIGHYVEAQVLESIGVDMVDESEVLTPADEVNHIDKRAFTAPFVCGARNLGEALRRIDEGAAMIRTKGEAGTGNVVEA
VKHMRAVNEGIARVIGYKEMGLEAELIQMARNELKVPMELISEVAELKRLPVVNFAAGGIATPADAALMMQMGCDGVFVG
SGIFKSGNPAVRAKAIVEATYNFDKPEVIAEVSKNLGEAMVGINIDEIPEEMLLAKRGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-79 67
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-79 67
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-79 66