Gene Information

Name : Ccan_09160 (Ccan_09160)
Accession : YP_004740141.1
Strain : Capnocytophaga canimorsus Cc5
Genome accession: NC_015846
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein yknY
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 977234 - 977923 bp
Length : 690 bp
Strand : -
Note : P-loop containing nucleoside triphosphate hydrolases (SSF52540); Undefined Gene3D domain (G3DSA:3.40.50.300); ATP BINDING CASSETE (ABC) TRANSPORTER (PTHR19222); ABC transporter-like (PS50893); ATPase, AAA+ type, core (SM00382); ABC transporter, macrolide

DNA sequence :
ATGAATTTACTAGAAATAAAGGATATTAAGCGTGATTTTCGATTGGGAAACGAAGTATTACACGTACTAAAAGGCATCAA
TTTGACCATAAAAAAGGGAGAATATGTTGCTCTTATGGGACCCTCTGGTTCAGGAAAATCTACCTTGATGAATATTTTGG
GCTGTTTAGATACTCCTACTTCGGGGAGTTACATTCTTAATGGAAAAGATGTTAGTAAAATGACGGATAATGAATTGGCA
GACATCCGAAATCGCGAAATCGGCTTCGTTTTTCAAACCTTCAATCTTATGCCACGAACTACCGCTTTGGACAATGTTGC
CTTACCGATGGTTTATGCGGGTTTTCCAAAGGAAGAACGACAAAAACGCTCCAAAGAAGTTTTAGAAATGGTAGGACTCT
CCGACCGTATAGACCATAAACCCAACCAACTTTCAGGGGGGCAACGTCAGCGAGTAGCTGTAGCCCGAGCTTTAGTAAAC
CACCCCTCGATAATTTTGGCTGATGAGCCTACAGGAAACCTTGACTCAAAAACCTCGTATGAAATTATGAATTTGTTCGA
CGAAATTCATAACCGAGGTAATACCGTGATTTTAGTAACCCACGAGGAAGATATTGCCAACCACGCGCATCGCATCATCA
GATTGCGTGACGGACTTATTGACAGCGACTTACATAAAAATAAATTTTAA

Protein sequence :
MNLLEIKDIKRDFRLGNEVLHVLKGINLTIKKGEYVALMGPSGSGKSTLMNILGCLDTPTSGSYILNGKDVSKMTDNELA
DIRNREIGFVFQTFNLMPRTTALDNVALPMVYAGFPKEERQKRSKEVLEMVGLSDRIDHKPNQLSGGQRQRVAVARALVN
HPSIILADEPTGNLDSKTSYEIMNLFDEIHNRGNTVILVTHEEDIANHAHRIIRLRDGLIDSDLHKNKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-37 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-37 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-37 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 6e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ccan_09160 YP_004740141.1 ABC transporter ATP-binding protein yknY NC_012469.1.7686878. Protein 8e-61 56
Ccan_09160 YP_004740141.1 ABC transporter ATP-binding protein yknY NC_008702.1.4606598. Protein 7e-51 49
Ccan_09160 YP_004740141.1 ABC transporter ATP-binding protein yknY CP001581.1.gene798.p Protein 1e-44 46
Ccan_09160 YP_004740141.1 ABC transporter ATP-binding protein yknY CP001581.1.gene598.p Protein 5e-44 44