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Name : Ccan_03900 (Ccan_03900) Accession : YP_004739619.1 Strain : Capnocytophaga canimorsus Cc5 Genome accession: NC_015846 Putative virulence/resistance : Virulence Product : Lysine--tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 435313 - 437010 bp Length : 1698 bp Strand : - Note : AltName: Full=Lysine--tRNA ligase;Short=LysRS; Undefined Gene3D domain (G3DSA:3.30.930.10); Aminoacyl-tRNA synthetase, class II (D/K/N)-like (PTHR22594); Nucleic acid-binding, OB-fold (G3DSA:2.40.50.140); Nucleic acid binding, OB-fold, tRNA/helicase-type DNA sequence : ATGCAACTATCAGAACAAGAGATAATTCGTAGAGAAAAACTTGATAAATTAAAAGAATTGGGTATCAATCCGTATCCAGC GGAATTGTATCCTGTTGATACAACTTCTACCGATGTAAAATCGGATTTTCAAGAGGGAAAGAAGGTAACTTTGGCGGGGC GACTAATGTCTGTCCGTATTCAAGGGAAAGCCTCTTTTGCTTCATTACAAGACAGCCAAGGACGCATACAGCTCTATATC AATCGTGATGAAATTTGTCCTGACGAAGACAAAACCCTTTACAATGAAGTATTTAAAAAATTGCTCGACTTGGGTGATTT CATCGGTGTGGAAGGCGAACTTTTCCTTACACAAGTGGGTGAAAAATCAGTTCGGGTAAAAAACTTCAAACTACTGAGCA AGGTACTTCGTCCGTTACCGCTTCCTAAAACCGATGCCGATGGAAATACCTTTGACGCCTTCACTGACCCCGAGCTTCGT TATCGTATGCGTTACGTGGATTTGGTGGTAAATCCTCAGGTGAAAGAGGTGTTTATCAAACGTACCAAACTTTTCAATGC GATGCGTCAGTTTTTCAATGAACGTGGTTATATGGAAGTGGAAACACCTGTGTTACAATCCATTCCAGGAGGAGCTGCGG CTCGTCCGTTCATCACGCATCATAATTCTTTGGACATTCCTTTGTATATGCGAATTGCCAACGAATTGTATCTGAAAAGA CTTATCGTGGGAGGATTTGACGGCGTGTACGAGTTCTCCAAAAACTTCCGAAACGAAGGAATGGACAGAACTCACAACCC TGAATTTACCGCAATGGAAATTTATGTGGCGTACAAGGACTACCATTGGATGATGGAGTTTACCGAACAATTGTTGGAGC ATTGTGCTATTGCCGTAAATGGCTCAACCAAAGCTACTTTTGGCAAACACGAAATTGATTTCAAAGCTCCGTATCCGCGA GTTACAATGACTGAAGCCATTCAAAAATTCACAGGATTTGACATCACCGGAAAAACCGAAAAAGAATTGTTCAATTTTGC TAAATCTATTGGGATTGAGGTTGATGACACAATGGGCAAAGGCAAACTAATAGACGAGATTTTCGGTGAGAAGTGCGAAG GAAATTTCATTCAACCTACATTTATCACGGATTATCCGAAAGAAATGTCGCCACTAACCAAAGAACATCGCAACGACCCC AATCTGACCGAGCGTTTCGAGCTGATGGTCTGCGGAAAAGAAATCGCCAATGCGTATTCCGAGTTAAATGACCCCATCGA CCAACGCGAACGTTTCGAGGCACAAATGGCTCTTTCTGAGCGAGGCGATGACGAGGCGATGTTCATCGACCAAGACTTTT TACGAGCGTTGGAATTTGGTATGCCTCCAACATCAGGCTTAGGAATCGGAATGGACAGACTCATAATGTTCCTGACCAAC AACGAAAGTATACAAGAAGTACTTTTCTTCCCACAGATGAAGCCTGAGGCGAAAGCCACACAGACAGTAGAATTAAACGA AGATGAAAAAATGGTATTTGAAATCCTCCAAAAAGCGGAAACACTTCCGTTGGAAGAGTTAAAAGCCCAATCGGGATTGT CTAACAAAAAATGGGATAAAACCATCAAAGGACTGACCAGCAAAAAGGTAGCTTCCGTTGAGAAACAAGACGATAATTTA TTGGTGAAATTAGTATAA Protein sequence : MQLSEQEIIRREKLDKLKELGINPYPAELYPVDTTSTDVKSDFQEGKKVTLAGRLMSVRIQGKASFASLQDSQGRIQLYI NRDEICPDEDKTLYNEVFKKLLDLGDFIGVEGELFLTQVGEKSVRVKNFKLLSKVLRPLPLPKTDADGNTFDAFTDPELR YRMRYVDLVVNPQVKEVFIKRTKLFNAMRQFFNERGYMEVETPVLQSIPGGAAARPFITHHNSLDIPLYMRIANELYLKR LIVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYHWMMEFTEQLLEHCAIAVNGSTKATFGKHEIDFKAPYPR VTMTEAIQKFTGFDITGKTEKELFNFAKSIGIEVDDTMGKGKLIDEIFGEKCEGNFIQPTFITDYPKEMSPLTKEHRNDP NLTERFELMVCGKEIANAYSELNDPIDQRERFEAQMALSERGDDEAMFIDQDFLRALEFGMPPTSGLGIGMDRLIMFLTN NESIQEVLFFPQMKPEAKATQTVELNEDEKMVFEILQKAETLPLEELKAQSGLSNKKWDKTIKGLTSKKVASVEKQDDNL LVKLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 8e-101 | 44 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 4e-80 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ccan_03900 | YP_004739619.1 | Lysine--tRNA ligase | VFG1668 | Protein | 5e-101 | 44 |
