Gene Information

Name : Ccan_03250 (Ccan_03250)
Accession : YP_004739554.1
Strain : Capnocytophaga canimorsus Cc5
Genome accession: NC_015846
Putative virulence/resistance : Virulence
Product : CMP-2-keto-3-deoxyoctulosonic acid synthase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 350818 - 351552 bp
Length : 735 bp
Strand : +
Note : AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid synthase;Short=CMP-KDO synthase;Short=CKS; 3-deoxy-D-manno-octulosonate cytidylyltransferase (TIGR00466); Undefined Gene3D domain (G3DSA:3.90.550.10); 3-deoxy-D-manno-octulosonate cytidylyltransferase (MF_0

DNA sequence :
ATGATCCCTGCGCGTTACAACGCTTCGCGATTTCCAGCAAAACTGATGCAAGACTTGGAGGGCAAACCCGTTATCGTACG
TACTTTTCAGGCAGTTGTTGCCACAGAATTGTTTGATAAAGTCTATGTGGTTACTGATGATGAGCGTATTGGGCAAAGCA
TAAAAGAGCACGGTGGAGAAGTTATTTATAGCCGTAAAGAACATCAAAGTGGGAGCGACCGACTTGCAGAGGCTTGTGAA
TTTTTAGATGTAGATGTTATTGTAAACGTTCAAGGAGATGAACCCTTTACCCAAAAAGAATCGTTAAGTTTACTGATTGA
TATTTTTAAAAAAGATTCGTGTAGAGAAGTAGATGTTGCTACTCTTATGGAGGAAATCGACAACCCTGAAGACATTTCCA
ATCCGAACAATGTAAAGGTAGTCGTCAATAAAAATTGTGATGCTCTTTACTTTTCACGAGCGTTTATTCCTTTTCCAAGA
GATCCCGATTCAGGGCTTTATCATAAACATATCGGGATATACGCTTATCGTAAATCGGCTTTGATGGCATTCTCTCAACT
GAATGAATCGATGCTCGAAAAAACCGAAAAACTCGAACAATTACGATATTTAGAAAACGGATTTAAAATTCGTCTGGCAC
TCACCAAGCAATCCACCATAGGTATCGATACCGAAGCCGACTTGATAAAAGCCAGAAAGTTGTGGAGAGAAACACAACAA
AATCAAAAAAAATAA

Protein sequence :
MIPARYNASRFPAKLMQDLEGKPVIVRTFQAVVATELFDKVYVVTDDERIGQSIKEHGGEVIYSRKEHQSGSDRLAEACE
FLDVDVIVNVQGDEPFTQKESLSLLIDIFKKDSCREVDVATLMEEIDNPEDISNPNNVKVVVNKNCDALYFSRAFIPFPR
DPDSGLYHKHIGIYAYRKSALMAFSQLNESMLEKTEKLEQLRYLENGFKIRLALTKQSTIGIDTEADLIKARKLWRETQQ
NQKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 2e-37 42
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 2e-37 42
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 2e-37 42