|
Name : Ccan_03170 (Ccan_03170) Accession : YP_004739546.1 Strain : Capnocytophaga canimorsus Cc5 Genome accession: NC_015846 Putative virulence/resistance : Virulence Product : chaperone protein clpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : 3.4.21.53 Position : 341808 - 344390 bp Length : 2583 bp Strand : - Note : Undefined Gene3D domain (G3DSA:3.40.50.300); Clp, N-terminal (PF02861); ATPase, AAA-type, core (PF00004); P-loop containing nucleoside triphosphate hydrolases (SSF52540); Clp ATPase, C-terminal (PF10431); ATPase, AAA+ type, core (SM00382); Chaperonin clpA DNA sequence : ATGAATTTTAATAATTATACCATCAAATCGCAAGAAGTCGTACAACGAGCCCAACAAATTGCTCAAAGTTACGGACACCA AGAATTGCAAAACGAACACTTTTTCAAAGCCATTGAAGAAGTAGACCAAAACGTATTGCCTTTCTTACTTAAAAAACTGA ATATCAACAGAGAACAACTCTCAAAAGTTTTGGAAACTGCCTTACAAAGCTTTCCGAAGGTTAGTGGCGGACAAATGTCG CTCTCGCGTGAGGCAAATACAATGCTCAACGAGGCGGTAAACATCGCCAAAAAAATGAATGACGAATACGTTTCTATCGA GCATTTAATTTTAGCTATCTTTAAGTCAAACAGCAAGATAGGACAAGCACTTAAAGACCAAGGCGTTAAGGAAAAGGACC TTGAAAAAGCCATTCAGGAATTGCGTAAAGGCGAACGCGTAACTTCGGCTTCGGCAGAAGAAACCTATAATTCGCTCAAC AAATACGCTAAAAATCTGAATCAAATGGCTGATAGCGGCAAACTTGACCCCGTGATTGGGCGTGATGAGGAAATTCGGCG TGTATTGCAAATCCTTTCTCGACGAACCAAAAACAACCCAATGCTCGTAGGAGAACCTGGGGTAGGAAAAACTGCCATCG CCGAAGGATTAGCTCATCGTATTGTTCAAGGAGATGTTCCTGAAAATCTGAAAGATAAATCCATCTATTCTTTGGATATG GGAGCCTTGATTGCAGGTGCGAAATACAAAGGCGAATTTGAAGAACGACTAAAATCCGTTGTAAAAGAAGTTACTTCGTC AGACGGAAATATCATTCTTTTCATTGATGAAATCCATACGCTTGTGGGTGCTGGTGGTGGCGAAGGAGCAATGGACGCTG CCAACATTCTCAAACCCGCTTTGGCTCGAGGCGAATTACGTGCAATCGGAGCTACAACATTGGACGAATATCAAAAATAT TTCGAAAAAGACAAAGCCTTAGAACGTCGTTTTCAGAAAGTTATGGTAGAAGAACCCGATACAGAAAGTGCTATTTCTAT CCTTCGCGGAATTAAAGAAAAGTACGAAACGCATCACAAAGTTCGCATCAAAGACGAAGCCATCATTGCCGCCGTTGAAC TTTCCGAGCGTTACATCACCAATCGTTTTCTGCCCGATAAAGCCATCGACCTAATGGACGAAGCCGCTGCAAAATTACGT ATGGAAATCAATTCGAAACCCGAAGAATTGGACGTTCTCGACCGAAAAATAATGCAGTTAGAGATTGAAATTGAAGCCAT TAAGCGTGAAAATGATGAGCAAAAACTCAAAATGCTTTATGCCGATGTAGCCAATTTGAAAGAAGAGCGAAACGCTATTT TCGCCAAATGGCAAAGCGAAAAGAATGTGATTGACGAGGTGCAAACCACCAAAGAGGCTATCGAAAATTACAAACTCGAA GCTGAAAAAGCCGAACGTGAGGGCGATTATGCCAAAGTAGCCGAACTTCGTTATGGAAAAATCAAAGAAGCCCAAGACAA TTTAGTACTTCTTCAAGAAAAATTAGACCAAGCACAAGGGAATTCACTTATAAAAGAAGAAGTTACATCGGAAAATATCG CCGAAGTAGTTGCCAAATGGACAGGAATTCCTGTAACGAAAATGTTACAAGGCGAACGCGAAAAGTTGCTAAAGTTAGAA AGTGAATTACACAAACGTGTCGTAGGGCAAGAGGAAGCTATCGAAGCCATTTCCGATGCTATCCGCCGAAGCAAAGCAGG TTTACAAGACCCTAAAAAGCCTATCGGTTCGTTCCTTTTCTTGGGTACAACTGGGGTCGGAAAAACTGAACTTGCCAAAG CTCTTGCCGAGTATCTGTTTGACGATGAGAATGCTATGACGCGTATCGATATGAGTGAATATCAAGAACGCCACGCCGTA AGCCGATTGGTGGGAGCTCCTCCGGGATACGTTGGATACGATGAAGGTGGACAACTTACTGAAGCCGTTCGCCGAAGACC TTATTCGGTAATTTTGTTAGACGAAATCGAAAAGGCTCACCCCGACACGTTTAACATTCTTTTACAAGTACTTGACGAAG GGCGACTTACAGACAACAAAGGACGCACTGCCGATTTCAAAAATACCATTATCATTATGACCTCCAACATTGGTAGCCAT TTGATACAAGAAAGTTTTGAAAAATACACAAACGACCTTGAAAAAGCCACAGAAGTTGCTAAAGATGATGTATTGCAATT ATTGAAGCAAACCGTTCGTCCTGAGTTCATTAACCGAATTGATGATATTGTGATGTTTACGCCACTCTCTCGCGAAAATA TCCGAAGCATTGTACGTTTGCAATTGCGTTCTATCATTAAAATGGTGGCTCGTGAAAATATTTTGCTCGACGCTACCGAT CAGGCGATTGATTATCTGGCAGAAAAAGGCTTTGACCCGCAATTTGGAGCTCGTCCCGTAAAACGAACACTTCAAAAAGA GGTACTTAACCGATTATCCAAAGAAATTTTGAGTGGCAACATCCACAAAGACAAAACCATTCTGTTAGATACCTTTGATA ATCAATTAGTTTTCAGAAATTAA Protein sequence : MNFNNYTIKSQEVVQRAQQIAQSYGHQELQNEHFFKAIEEVDQNVLPFLLKKLNINREQLSKVLETALQSFPKVSGGQMS LSREANTMLNEAVNIAKKMNDEYVSIEHLILAIFKSNSKIGQALKDQGVKEKDLEKAIQELRKGERVTSASAEETYNSLN KYAKNLNQMADSGKLDPVIGRDEEIRRVLQILSRRTKNNPMLVGEPGVGKTAIAEGLAHRIVQGDVPENLKDKSIYSLDM GALIAGAKYKGEFEERLKSVVKEVTSSDGNIILFIDEIHTLVGAGGGEGAMDAANILKPALARGELRAIGATTLDEYQKY FEKDKALERRFQKVMVEEPDTESAISILRGIKEKYETHHKVRIKDEAIIAAVELSERYITNRFLPDKAIDLMDEAAAKLR MEINSKPEELDVLDRKIMQLEIEIEAIKRENDEQKLKMLYADVANLKEERNAIFAKWQSEKNVIDEVQTTKEAIENYKLE AEKAEREGDYAKVAELRYGKIKEAQDNLVLLQEKLDQAQGNSLIKEEVTSENIAEVVAKWTGIPVTKMLQGEREKLLKLE SELHKRVVGQEEAIEAISDAIRRSKAGLQDPKKPIGSFLFLGTTGVGKTELAKALAEYLFDDENAMTRIDMSEYQERHAV SRLVGAPPGYVGYDEGGQLTEAVRRRPYSVILLDEIEKAHPDTFNILLQVLDEGRLTDNKGRTADFKNTIIIMTSNIGSH LIQESFEKYTNDLEKATEVAKDDVLQLLKQTVRPEFINRIDDIVMFTPLSRENIRSIVRLQLRSIIKMVARENILLDATD QAIDYLAEKGFDPQFGARPVKRTLQKEVLNRLSKEILSGNIHKDKTILLDTFDNQLVFRN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 9e-100 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 7e-100 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ccan_03170 | YP_004739546.1 | chaperone protein clpB | VFG2084 | Protein | 3e-106 | 42 |
