Gene Information

Name : Ccan_23480 (Ccan_23480)
Accession : YP_004741569.1
Strain : Capnocytophaga canimorsus Cc5
Genome accession: NC_015846
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1288
EC number : -
Position : 2511241 - 2512734 bp
Length : 1494 bp
Strand : -
Note : N-terminus: SpI(LipoP); 13 transmembrane domains; CATION TRANSPORTER RELATED (PTHR10283); C4-dicarboxylate anaerobic carrier-like (PF03606); Arginine/ornithine antiporter, ycgA (PTHR10283:SF43)

DNA sequence :
ATGAAACGATTTTTAAAATTTCCGACGCCCTATACGGTGTTGATGATTGTTATTGTTATTGCGGCAGGATTGACTTTTTT
ATTGCCTTCGGGTAAGTACGATACGCTTTCTTACGATAGTGTGCAAAATGTGTTTGTGATAAACTCGAAGGGAGAAACGC
AAACCTTACCAGCTACACAACAAACCCTCGCCGAAAAGAATATTTCTATCAGCATTGAAAAATTCAAAGAAGGAAAAATT
AAAAAACCAGTTTCTATTCCAAATACGTACAAGCAAGATGAAGCCAAACCGCAAGGTTTTTTAGAAATCCTTTATGCTCC
GATTAAGGGAATTTACGATACGATTGATATTATTTTGTTCGTATTGGTTTTGGGTGGCTTTATCGGAATTTTTAATAGCT
CGGGGACGCTGAATGAAGGGGTTGGCTATCTGGCTTACAGGCTGAAAGGCAGGGAAGGAATCCTCATTATTTTGGTTTTT
ACGCTCATCGCTTTAGGGGGGACTTTTTTCGGTTTGGCAGAAGAAACACTCGCCTTTTATCCAATGCTTATTCCTGTGTT
TTTGGCGGCAGGATACGATTTGATGGTCCCTCTGGCTGTGATTTATCTGGGTTCGTGTGTAGGGACGATGGCTTCGACAG
TAAATCCGTTTTCGGTTATTATCGCCTCTGATGCAGTAGGAGTTGATTGGACAACAGGGCTGGTAACACGTCTTGTAATG
CTTGTACTTTCAACTGTAATTAGCTTGGTGTACATTATTCGCTATGCAGAAAAGGTAAAACGCAACCCACAAGCATCGGT
GGCGTATGGTGCATCACTTCCTGAATCGTTACATAATGAAAAAGCAGTTCCTGTGGAGCAACTTAAGCTATCAAGTAAAC
TTTTGCTCGTTGTTTTTGGATTGTCTTTTCTAGTGATGATTCTTGGTGTTTCGCAATGGGGTTGGTGGTTTGAGGAGATG
ACGGCTTTATTTTTAGTTGCTTCTGTAATCATTGCTATTTTGCAGCGTACGGGCGAGGAACAATCCATTGCTCATTTTTT
GACAGGTGCGAAAGATTTACTGGGTGTGGCTTTTATTATCGGTATTGCCCGAGGAGTTACTTTTATACTTAATGACGGAC
AAATCTCAGATACGATTCTTTATTACTCGTCGAACTTAGTAAGCGGAATGTCTCCTGCGTTGTTTTTACCTGTATTGATG
TTTATTTTCGTGATACTTACCTTGTTCATCGCTTCTTCATCAGGAATGGCAGTAGTAACGATGCCTATTATGGGCGGATT
AGCATCAGTGGTGGGAGTGGAGGGGCAAAGTGTGGTAAATGCTTATCTGTTTGGAATGGGATTGATGAGTTTTATTACCC
CAACGGGACTAATTTTGCCTTCACTTGCAATGGTAAACCTCAACTATAAACAATGGTTGCGGTTTGTATCGCCTTTGATG
CTTATTTTGGTGGTTTTAGCCATTGGTGTTTTATTGGTAGAATATTATTTGTAA

Protein sequence :
MKRFLKFPTPYTVLMIVIVIAAGLTFLLPSGKYDTLSYDSVQNVFVINSKGETQTLPATQQTLAEKNISISIEKFKEGKI
KKPVSIPNTYKQDEAKPQGFLEILYAPIKGIYDTIDIILFVLVLGGFIGIFNSSGTLNEGVGYLAYRLKGREGILIILVF
TLIALGGTFFGLAEETLAFYPMLIPVFLAAGYDLMVPLAVIYLGSCVGTMASTVNPFSVIIASDAVGVDWTTGLVTRLVM
LVLSTVISLVYIIRYAEKVKRNPQASVAYGASLPESLHNEKAVPVEQLKLSSKLLLVVFGLSFLVMILGVSQWGWWFEEM
TALFLVASVIIAILQRTGEEQSIAHFLTGAKDLLGVAFIIGIARGVTFILNDGQISDTILYYSSNLVSGMSPALFLPVLM
FIFVILTLFIASSSGMAVVTMPIMGGLASVVGVEGQSVVNAYLFGMGLMSFITPTGLILPSLAMVNLNYKQWLRFVSPLM
LILVVLAIGVLLVEYYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAUSA300_1064 YP_493762.1 TRAP family protein Not tested vSa¥ã Protein 1e-78 42
SAKOR_01092 YP_008491280.1 Arginine/ornithine antiporter Not tested vSa¥ã Protein 5e-79 42
SAV1171 NP_371695.1 hypothetical protein Not tested vSa¥ã Protein 4e-78 42
SA1014 NP_374287.1 hypothetical protein Not tested vSa¥ã Protein 4e-78 42
MW1052 NP_645869.1 hypothetical protein Not tested vSa¥ã Protein 1e-78 42
SACOL1183 YP_186046.1 hypothetical protein Not tested vSa¥ã Protein 1e-78 42