Gene Information

Name : Ccan_14380 (Ccan_14380)
Accession : YP_004740661.1
Strain : Capnocytophaga canimorsus Cc5
Genome accession: NC_015846
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase recG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : 5.99.1.3
Position : 1545778 - 1547883 bp
Length : 2106 bp
Strand : +
Note : P-loop containing nucleoside triphosphate hydrolases (SSF52540); Undefined Gene3D domain (G3DSA:3.40.50.300); Helicase, superfamily 1/2, ATP-binding domain (PS51192); DNA/RNA helicase, DEAD/DEAH box type, N-terminal (PF00270); DNA/RNA helicase, C-terminal

DNA sequence :
GTGAATCCTGAGGTTTTACATACTCCTATTGTATATCTGCGTGGTGTTGGTACTCAACGTGCTGAACTACTCAAAAGCGA
ACTAGGCATACACCAATTTCAAGATTTACTTAACCTCTTCCCCAATCGATATATTGATCGTACTCGATTTTATAAAATCA
GCGAACTGCAAAACAACTCTGCCGAGGTACAAATCGTTGGTAAAATCATACATCTTAAAACGGTAAGTTCGGGCAACAAT
AACCGATTGGTTGCCACTTTTACTGATGATATAAGTACAATGGAATTGGTTTGGTTTAAGGGTATCAAATGGCTACGCGA
CACTTTAAAAATCAACGAACCTTACGTGATTTACGGAAAAATAAATTGGTTTAATGGGGCTTTTTCTATGCCACATCCTG
AAATGGATTTGGTAGCTGATTTTAACCAAACGATGGGCAATACTATTCAACCCGTATATCCTTCCACCGAAAAATTATCT
AAAAGAGGCGTTACCAATAGAGTAATTCGGCAACTGATGCAAAACTTATTTCAAGATGTAGGTAAAGCATTTTATGAAAC
ACTCCCCCACTCCATACTTTCAAGTTTAAATCTGATTTCAAAATCAGAGGCTTTGGTAAATATTCATTTCCCAAAAAGTC
AAGAACTTTTAGGTAAGGCTCAAATGCGTTTGAAATTTGAAGAACTCTTTTACATCCAATTGCAATTGGTCAGAAAAAAC
ATTTTACAAAAACAACGTTTTAAAGGCTTTACTTTTGATAAGGTAGGCGAGGTTTTTTCCGATTTTTATAACAACCGATT
GCCCTTTGACCTTACTCAAGCACAGAAGCGCGTACTGAAAGAAATCCGTAACGATGTGGGGTCTAACGCTCAAATGAACC
GACTGCTTCAAGGCGATGTAGGTTCAGGAAAAACCATTGTAGCACTAATGGCAATGCTACTTGCCATTGATAACGGCTTT
CAGGCTTGTTTGATGGCGCCCACCGAAATCCTTGCCTCACAGCATTTTCAAAGTATTTCTGAATTATTAGAGGGTTCGTC
AGTGACCATTACGCTTTTAACAGGCTCCACCAAAAACAGCCAACGCAAAATTATTGATGAGCAATTACAAGAAGGTTCAT
TACAGATTTTGGTAGGCACTCACGCTTTGTTGGAAGATAAAGTAAAGTTCAAAAACTTAGGTTTTGCCATTATTGACGAA
CAACATCGTTTTGGGGTAGAACAACGCTCTAAATTGTGGAAGAAAAATCACAGACCGCCACATATTTTAGTAATGACCGC
AACGCCCATACCGCGTACCTTAGCTATGAGTGTTTATGGTGATTTGGATATTTCCATCATTGATGAGCTTCCCCCTGGAA
GAAAACCTATACAAACCGTACATCGTTATGAAAATCATCGTGCTAAAGTCTATGAATTTATAAAAAAGGAGATTGATCAA
GGCAGACAAGCTTACGTGGTATATCCGCTTATAGAAGAATCCGAATCGTTAGACTTTAAGAACCTTACCGAAGGCTTTGA
GTACATTGAAAATAGCTTTCCAAGACCCAAATACCAGATTTCTATGGTACACGGACGAATGAAACCTGCAGAGAAAGATG
CCGAAATGGAAAAATTCAAGCAAGGCATTACGCAAATTATGGTAGCCACCACCGTAATTGAAGTAGGAGTCAATGTACCT
AATGCTTCAGTTATGGTTATCGAAAGTGCAGAACGCTTTGGGCTTTCACAACTTCATCAATTACGCGGACGAGTAGGAAG
AGGCAACCAACAAAGTTATTGTATCTTACTCACTGGAAATAAATTAGGGAGCGATTCACTCACCCGTATGCAAACAATGA
CTCAAACCAATGATGGCTTTCAAATTGCTGAAGTAGATTTAAAACTCCGCGGACCAGGTGATTTAATGGGTACGCAACAA
AGTGGCGTTCTTGCCCTAAAAATTGCCGACTTGGTTAAAGACCAAACCCTCTTAAGGGCAGCCCGAGCAGAAGCTATTCA
ATTATTAAAATCAGACCCTGAGCTTAAAACCCCTGAAAACAGAACTGTTGCCTACACCTTACATCAATTACATACGCATA
AAAATATCTGGACATTCATTAGCTAA

Protein sequence :
MNPEVLHTPIVYLRGVGTQRAELLKSELGIHQFQDLLNLFPNRYIDRTRFYKISELQNNSAEVQIVGKIIHLKTVSSGNN
NRLVATFTDDISTMELVWFKGIKWLRDTLKINEPYVIYGKINWFNGAFSMPHPEMDLVADFNQTMGNTIQPVYPSTEKLS
KRGVTNRVIRQLMQNLFQDVGKAFYETLPHSILSSLNLISKSEALVNIHFPKSQELLGKAQMRLKFEELFYIQLQLVRKN
ILQKQRFKGFTFDKVGEVFSDFYNNRLPFDLTQAQKRVLKEIRNDVGSNAQMNRLLQGDVGSGKTIVALMAMLLAIDNGF
QACLMAPTEILASQHFQSISELLEGSSVTITLLTGSTKNSQRKIIDEQLQEGSLQILVGTHALLEDKVKFKNLGFAIIDE
QHRFGVEQRSKLWKKNHRPPHILVMTATPIPRTLAMSVYGDLDISIIDELPPGRKPIQTVHRYENHRAKVYEFIKKEIDQ
GRQAYVVYPLIEESESLDFKNLTEGFEYIENSFPRPKYQISMVHGRMKPAEKDAEMEKFKQGITQIMVATTVIEVGVNVP
NASVMVIESAERFGLSQLHQLRGRVGRGNQQSYCILLTGNKLGSDSLTRMQTMTQTNDGFQIAEVDLKLRGPGDLMGTQQ
SGVLALKIADLVKDQTLLRAARAEAIQLLKSDPELKTPENRTVAYTLHQLHTHKNIWTFIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 1e-99 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ccan_14380 YP_004740661.1 ATP-dependent DNA helicase recG BAC0356 Protein 4e-100 42