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Name : Ccan_10940 (Ccan_10940) Accession : YP_004740317.1 Strain : Capnocytophaga canimorsus Cc5 Genome accession: NC_015846 Putative virulence/resistance : Unknown Product : serine--tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1163320 - 1164591 bp Length : 1272 bp Strand : - Note : AltName: Full=Seryl-tRNA(Ser/Sec) synthetase;AltName: Full=Serine--tRNA ligase;Short=SerRS; tRNA-binding arm (SSF46589); Seryl-tRNA synthetase, class IIa, N-terminal (G3DSA:1.10.287.40); Seryl-tRNA synthetase, class IIa, C-terminal (PR00981); Seryl-tRNA s DNA sequence : ATGTTACCACTTAGTTACATTCGCGAAAATAGACAAAAGGTCATTGAAGGACTTAAAAAACGGAATTTCAAAGAATTAGA TATTATTGATCAAGTAATCACTCTTGATGAGAAACGACGAACCACTCAAGCCGAATTGGATAATATCCTTGCCGAATCAA ATGCCATTTCTAAAGAAATCGGAAATTTGTTCAAATCTGGAAATGCTGCTCAAGCAAATGTGCTCAAAGAAAAAACAGGA GATTTGAAAGAAAAATCAAAAGAACTTTCGGACTTACTGGCACAGATTACCGCATCACTTAATGAATTCTTGTATCGTAT CCCTAACGTACCCAATGACATTGTGCCTAATGGAACTTCTGAAACCGACAATGAAGAGGTTTTCAAAGCAGGAGCTATTC CTCAACTGCATTCCGAAGCCCTTCCGCATTGGGAATTGGCCAAAAAATATAATATTATAGACTTTGAATTGGGTGTTAAA ATTACTGGAGCTGGTTTTCCTGTTTACAAAGGCAAGGGAGCAAAATTACAAAGAGCTTTGATTGCTTATTTTTTAGATAA AAACACCCAAGCAGGGTATCAAGAAGTACAAGTGCCTCACGTGGTAAACGAAGCCTCAGGTTACGGAACAGGGCAACTTC CTGATAAAGAAGGACAAATGTATCACGTAACTGCTGATGATTTGTACTTAATCCCTACCGCCGAAGTGCCTGTGACCAAC TTTTTTAGAGATGTTTTACTCTCTGAAAAAGATTTTCCGATATGCTATACCGCATACACGCCTTGTTTTAGAAGAGAAGC AGGGAGCTATGGTGCACACGTTCGCGGCCTAAACCGACTCCACCAATTTGATAAGGTTGAAATTGTGCGTGTGGAGCATC CTGAAAATTCTTACCAAGCTTTGGAAGGTATGGTTGAACACGTCAAATCAATTTTGAACGAGCTGAAGTTGCCTTACAGA ATTTTGCGTCTGTGTGGTGGCGATTTAGGGTTCACCTCTGCCCTAACCTATGACTTTGAAGTTTATTCCACAGCTCAAGA AAAATGGTTGGAAATCAGCTCTGTGTCTAACTTTGAAACTTTTCAAGCCAATCGTTTAAAATTGAGATATAAAGACACTG AAGGAAAAAGTCAGTTGGCTCATACCCTTAACGGAAGCTCTTTGGCACTACCCCGAGTTTTAGCTGGTATTTTGGAAAAT TACCAAACTCCTGAAGGGATTGTTATTCCAGAAGTTTTACGTCCTTATACTGGATTTGATATTATTGATTAA Protein sequence : MLPLSYIRENRQKVIEGLKKRNFKELDIIDQVITLDEKRRTTQAELDNILAESNAISKEIGNLFKSGNAAQANVLKEKTG DLKEKSKELSDLLAQITASLNEFLYRIPNVPNDIVPNGTSETDNEEVFKAGAIPQLHSEALPHWELAKKYNIIDFELGVK ITGAGFPVYKGKGAKLQRALIAYFLDKNTQAGYQEVQVPHVVNEASGYGTGQLPDKEGQMYHVTADDLYLIPTAEVPVTN FFRDVLLSEKDFPICYTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRVEHPENSYQALEGMVEHVKSILNELKLPYR ILRLCGGDLGFTSALTYDFEVYSTAQEKWLEISSVSNFETFQANRLKLRYKDTEGKSQLAHTLNGSSLALPRVLAGILEN YQTPEGIVIPEVLRPYTGFDIID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-76 | 45 |
