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Name : clpC (zobellia_469) Accession : YP_004734931.1 Strain : Zobellia galactanivorans DsiJT Genome accession: NC_015844 Putative virulence/resistance : Virulence Product : chaperone ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 605383 - 607929 bp Length : 2547 bp Strand : + Note : ClpC may interact with a clpP-like protease involved in degradation of denatured proteins and could be required for cell growth at high temperature; Contains 2 Clp amino terminal domains that function as a substrate-discriminating domain, 2 AAA ATPase dom DNA sequence : ATGGATGATAATTTTTCACCGAGGGTAAAAGACGTAATTGCTTACAGCAAAGAAGAAGCGCTGCGGTTGGGCCATGATTT CATTGGTACCGAGCACTTGATGCTGGGGCTTTTGCGGGATGGTAACGGCAAGGCAATTAGCATTCTTGACGCTATGGAGG TGGATTTAGATCACCTCAGGCGAAAGGTCGAAATTCTCAGCCCCTCCAATCCAAACCCGAACAACTTACAAAAAGATAAA AAGAACTTGCACTTGACGAGACAGGCGGAGCGTGCCCTAAAAACCACATTTTTAGAAGCCAAGCTTTTCCAGAGCTCCTC GATCAATACGGCCCATTTGCTATTGTGCATTCTAAGGAACGAAAATGACCCCACCACGAAACTGCTTCACAAGTTGAAAG TAGATTACGACGGTGTAAAGGAACAGTTTAAATTTATGATTACAAGCGACGACGATATTGTAGACGCCCCAACTTCCGAA TCGTTTCCGAGCGATAGCGACGACAACGAAGGAAAAGAAGGAAGTTTTGGCACTACGGCAGGACCAAAAGGAAACAAAAA ATCAAAAACCCCCGTACTGGACAACTTTGGCCGCGACCTTACACTCATGGCCGAGGAAAACAAGCTAGACCCCGTTGTGG GAAGGGACAAGGAAATTGAACGTGTTTCCCAAATACTAAGTAGAAGAAAGAAAAACAACCCGCTTTTGATCGGAGAGCCC GGTGTTGGTAAAAGTGCCATTGCCGAAGGCTTGGCCTTAAGGATCATCAACAAAAAGGTTTCCCGTATCCTATACAACAA AAGGGTGGTGACCCTTGATCTGGCGTCTTTGGTAGCCGGCACAAAATACCGTGGCCAGTTCGAAGAGCGCATGAAGGCGG TAATGAACGAACTTGAAAAGAATGACGATGTCATCCTTTTCATTGACGAGATACACACCATTGTAGGTGCAGGCGGTGCT ACGGGCAGTTTAGATGCCTCCAACATGTTCAAACCGGCATTGGCCCGGGGCGAAATCCAATGTATAGGTGCCACTACCCT AGATGAGTACCGACAGTACATTGAAAAAGACGGGGCGCTCGAAAGACGCTTTCAAAAGGTAATCGTTGAACCGACTACGG TTGAGGAAACCATTGAAATTCTTCACAACATCAAAGGGAAATACGAAGACCACCATAACGTAAACTACACTGACGAAGCT ATCATAGCCTGTGTTAAGCTTACGAACCGTTATATGACGGACCGATTCTTACCGGACAAGGCCATTGATGCCCTTGACGA AGCAGGTTCTCGCGTCCATATCGTTAACATGGATGTACCCAAGCAGATCCTTGAACTCGAAAAACAACTTGAAGATGTTC GCGAGCTAAAGAACAGCGTGGTCAAAAAACAGAAATACGAAGAGGCCGCTAAATTGCGCGATGACGAGAAACGTCTTGAA AAAGACTTGGCTACCGCTCAAGAAAAATGGGAAGAAGACAGTAAGCTTCATAAAGAAACGGTAACGGAAGACAATGTGGC CGACGTGGTTTCCATGATGAGCGGCATACCCGTAAACCGAATTGCACAAACGGAAAGCAACAAACTTGCCGAACTGCCCA ACTTGATCAAATCAAACGTAATCGGTCAAGACGAGGCGGTAGCAAAAGTAGCCAAGGCCATTCAAAGAAACCGGGCCGGA CTGAAAGATCCGAACAAGCCTATTGGTTCGTTCATCTTCCTAGGTCAGACCGGGGTAGGCAAAACCCAATTGGCCAAAGT ACTGGCCAAGGAACTTTTTGACTCTGAAGATGCCTTGATTCGTATCGATATGAGCGAATACATGGAAAAATTCGCCATTT CCCGATTGGTAGGAGCACCTCCAGGATATGTAGGCTACGAAGAAGGCGGTCAGTTGACCGAAAAGGTAAGACGCAAGCCT TACTCCGTTATTCTTCTAGATGAAGTAGAAAAAGCACATCCCGATGTATTCAATATGTTGCTACAAGTGCTAGACGACGG CTACCTTACCGATAGTTTGGGCAGAAAAATTGATTTTAGAAACTCTATTATCATTATGACCTCAAACATTGGCGCGAGAA AACTAAAAGATTTCGGACAAGGTATCGGCTTCGGCACATCGGCCATGAAGTCCCAAGAAGACAGTCACCAAAAGAGTGTT ATAGAAGGTGCCCTTAAAAAGGCCTTCGCACCCGAATTCTTGAACAGGATCGACGATGTGATCGTATTTAATGCACTTGA AAGAGAAGACATCCACAAAATCATAGATATTGAACTTAAAAAGCTTTTTGCTAGAATTAAGGATATCGGCTACGATTTAA AATTAACCGATAAAGCCAAAGACTACATTGCCGACAAGGGTTTTGATAAACAATATGGCGCCAGACCTTTAAAAAGGGCT ATTCAAAAATATATTGAAGATGCACTGGCCGAAGAGATCGTAAACTCAAAACTTGAAGATGGCGATAGTATTATCATGGA CCTCGACGAGAAAAAAGAGGAACTTACCATAGAAATCAAAAAAGCGGAAAAGTCTTCGAATACCTAA Protein sequence : MDDNFSPRVKDVIAYSKEEALRLGHDFIGTEHLMLGLLRDGNGKAISILDAMEVDLDHLRRKVEILSPSNPNPNNLQKDK KNLHLTRQAERALKTTFLEAKLFQSSSINTAHLLLCILRNENDPTTKLLHKLKVDYDGVKEQFKFMITSDDDIVDAPTSE SFPSDSDDNEGKEGSFGTTAGPKGNKKSKTPVLDNFGRDLTLMAEENKLDPVVGRDKEIERVSQILSRRKKNNPLLIGEP GVGKSAIAEGLALRIINKKVSRILYNKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEKNDDVILFIDEIHTIVGAGGA TGSLDASNMFKPALARGEIQCIGATTLDEYRQYIEKDGALERRFQKVIVEPTTVEETIEILHNIKGKYEDHHNVNYTDEA IIACVKLTNRYMTDRFLPDKAIDALDEAGSRVHIVNMDVPKQILELEKQLEDVRELKNSVVKKQKYEEAAKLRDDEKRLE KDLATAQEKWEEDSKLHKETVTEDNVADVVSMMSGIPVNRIAQTESNKLAELPNLIKSNVIGQDEAVAKVAKAIQRNRAG LKDPNKPIGSFIFLGQTGVGKTQLAKVLAKELFDSEDALIRIDMSEYMEKFAISRLVGAPPGYVGYEEGGQLTEKVRRKP YSVILLDEVEKAHPDVFNMLLQVLDDGYLTDSLGRKIDFRNSIIIMTSNIGARKLKDFGQGIGFGTSAMKSQEDSHQKSV IEGALKKAFAPEFLNRIDDVIVFNALEREDIHKIIDIELKKLFARIKDIGYDLKLTDKAKDYIADKGFDKQYGARPLKRA IQKYIEDALAEEIVNSKLEDGDSIIMDLDEKKEELTIEIKKAEKSSNT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 5e-177 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_004734931.1 | chaperone ClpC | VFG0079 | Protein | 0.0 | 51 |
| clpC | YP_004734931.1 | chaperone ClpC | VFG0080 | Protein | 1e-147 | 48 |
