Gene Information

Name : pdhD (zobellia_4607)
Accession : YP_004739021.1
Strain : Zobellia galactanivorans DsiJT
Genome accession: NC_015844
Putative virulence/resistance : Unknown
Product : dihydrolipoyl dehydrogenase, E3 component
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1249
EC number : 1.8.1.4
Position : 5310712 - 5312118 bp
Length : 1407 bp
Strand : -
Note : The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2, linking glycolysis to the tricarboxylic acid cycle. It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoa

DNA sequence :
ATGAGTTCATACGATGTGGCCATTATTGGCTCAGGACCAGGAGGGTATGTTGCTGCCATTCGTTGTGCGCAGTTGGGCAT
GAAAACCGCAATTATCGAAAAATATAGCACATTGGGCGGTACTTGCTTGAATGTTGGCTGTATACCGTCAAAAGCTTTGT
TAGATTCTTCGCACCATTACGAAGATGCGATAAAGCATTTTGAAGAGCACGGTATCGATATACCGGGTGAGATAAAAGTT
AACCTTGGGCAGATGATCGCAAGAAAGGCCGCTGTGGTAAAGCAGACTTGTGACGGTGTGAAGTTCTTGATGGACAAAAA
CAAAATCGATGTTTTTGAAGGATTCGGAAGCTTTAAGGACGCTTCACATATAAATATCAAAAAAAATGATGGTAGTACGG
AAACTATCGAGGCCAAGAACACCATCATAGCCACAGGAAGCAAACCTTCTACACTTCCTTTTATCAAAATAGATAAAGAA
CGTATCATAACCTCTACGGAGGCTTTGGAGTTGAAGGAAATACCGAAACACTTAATCGTTATCGGTGGTGGGGTGATAGG
CTTGGAACTTGGTCAAGTGTATAAGCGTTTGGGTGCCGAAGTTACCGTAGTGGAATATATGGATCGTATTATTCCGACCA
TGGATGCGGGACTTTCAAAAGAGCTTACCAAGGTTTTGAAAAAACAAAAAGTAAAACTCAATGTATCCCATAAAGTAAAA
TCGGTAGAAAGAAAAGGCGATGAGATTATCGTTAAAGCCGATGATAAAAAAGGACAGGAAGTAGAGTTGAAAGGCGATTA
TTGTCTGGTGTCGGTAGGGCGTAGGCCATATACCGATGGACTGAACGCAGAAGCTGCCGGGGTTAAAATCGATGAGCGCG
GAAAAATTGAAGTAAACGACCACTTGCAAACCAGTACCCCTAATATTTACGCCATTGGCGATGTGATCAAAGGTGCGATG
TTGGCACATAAGGCCGAAGAGGAAGGAACCTTTGTTGCCGAACAATTGTCGGGACAAAAACCACATATCGATTACAATCT
AATACCTGGTGTGGTCTATACTTGGCCTGAAGTTGCTTCTGTAGGAAAAACGGAAGAGCAGTTGAAGGAAGCTGGTGTGG
CGTATAAAACAGGACAATTTCCAATGCGTGCCTTGGGACGTTCCCGAGCCAGTATGGATTTGGACGGATTTGTAAAAATC
CTGGCCGATAAGGAAACCGATGAAGTTTTAGGTGTACATATGATCGGGGCACGTGCTGCCGATTTGATTGCCGAAGCGGT
TACGGCCATGGAGTTTAGGGCGTCTGCGGAAGATATCTCTAGAATGAGCCATGCGCATCCGACATTTGCGGAAGCCGTAA
AAGAAGCGGCCCTTGCCGCTACCGATAACCGTGCCTTGCACGTTTAA

Protein sequence :
MSSYDVAIIGSGPGGYVAAIRCAQLGMKTAIIEKYSTLGGTCLNVGCIPSKALLDSSHHYEDAIKHFEEHGIDIPGEIKV
NLGQMIARKAAVVKQTCDGVKFLMDKNKIDVFEGFGSFKDASHINIKKNDGSTETIEAKNTIIATGSKPSTLPFIKIDKE
RIITSTEALELKEIPKHLIVIGGGVIGLELGQVYKRLGAEVTVVEYMDRIIPTMDAGLSKELTKVLKKQKVKLNVSHKVK
SVERKGDEIIVKADDKKGQEVELKGDYCLVSVGRRPYTDGLNAEAAGVKIDERGKIEVNDHLQTSTPNIYAIGDVIKGAM
LAHKAEEEGTFVAEQLSGQKPHIDYNLIPGVVYTWPEVASVGKTEEQLKEAGVAYKTGQFPMRALGRSRASMDLDGFVKI
LADKETDEVLGVHMIGARAADLIAEAVTAMEFRASAEDISRMSHAHPTFAEAVKEAALAATDNRALHV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0077 NP_763632.1 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 Not tested SCCpbp4 Protein 1e-64 43