Gene Information

Name : rdgB (zobellia_39)
Accession : YP_004734504.1
Strain : Zobellia galactanivorans DsiJT
Genome accession: NC_015844
Putative virulence/resistance : Unknown
Product : nucleoside-triphosphate diphosphatase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0127
EC number : 3.6.1.19
Position : 38740 - 39309 bp
Length : 570 bp
Strand : +
Note : Hydrolyzes, in presence of divalent cations, O6 atom-containing purine bases deoxyinosine triphosphate (dITP) and xanthosine triphosphate (XTP) as well as 2'-deoxy-N-6-hydroxylaminopurine triposphate (dHAPTP) to nucleotide monophosphate and pyrophosphate.

DNA sequence :
ATGAAACTGGTTTTCGCAACGCACAACAAGAACAAACTCGACGAGGTAAAGGCACTCGTACCCTCACATATCGAACTGGT
TTCATTGACCGATATCGGCTGTTTTGACGAAATACCCGAAACTGGAAGCACCTTAGAGGAAAACGCCCAACTAAAAGCCG
ATTACGTTACCGAAAATTACGGCTTACCGTGCTTTGCAGACGACACCGGCCTTTTAGTAGACGCATTAAACGGTGAACCC
GGGGTCTTCTCCGCAAGATATGCCGGTGAAGGCAAAAATGCCGACGACAACATGAACAAACTTTTGACCAAGTTAAAAGA
CCACCCTAATCGTTCTGCACACTTTAAAACAGCAATAGCCCTAAACCTAAACGAAAAAAAATACATGTTCGAGGGCATAG
TGGAAGGCCATATAACCTCGCAAAAAACAGGGGGTGGCGGTTTTGGCTATGATCCTATTTTTCAACCCAAGGGATACAAA
AAGACCTTTGCCGAAATTCCCTTGGAAACCAAAAACCGTATCAGCCACAGGGGCCTAGCCATTCAAAAATTATTAGATTT
CCTTCGATAA

Protein sequence :
MKLVFATHNKNKLDEVKALVPSHIELVSLTDIGCFDEIPETGSTLEENAQLKADYVTENYGLPCFADDTGLLVDALNGEP
GVFSARYAGEGKNADDNMNKLLTKLKDHPNRSAHFKTAIALNLNEKKYMFEGIVEGHITSQKTGGGGFGYDPIFQPKGYK
KTFAEIPLETKNRISHRGLAIQKLLDFLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1465 YP_001800859.1 deoxyribonucleotide triphosphate pyrophosphatase Not tested Not named Protein 4e-23 41