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Name : lpsL (zobellia_3778) Accession : YP_004738195.1 Strain : Zobellia galactanivorans DsiJT Genome accession: NC_015844 Putative virulence/resistance : Virulence Product : UDP-glucuronate 4-epimerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : 5.1.3.6 Position : 4436292 - 4437308 bp Length : 1017 bp Strand : - Note : UDP-glucuronate 4-epimerase converts the UDP-glucuronate to UDP-D-galacturonate. LpsL is involved in lipopolysaccharide biosynthesis; Belongs to the NAD dependent epimerase/dehydratase, Rossmann fold Superfamily; Localized in the cytoplasmic membrane; Hig DNA sequence : ATGAAAATTCTTGTCACCGGTGCAGCCGGTTTTATAGGATATCATCTCTGTGAAAAACTCTTGCATCAAGGTTTTGAGGT CGTCGGCCTAGATAACATCAACGATTATTACGATGTAAACCTCAAATACGACCGTCTGAAGCAATTGGGCATTGAACGGA GCGATGCCCAAACATTTCGTAAAAAATGTTACGGCTCCATCTATGGTGACAAATTTTCTTTTGTTCGAATGAACCTCGAA GACCGGGACGCCCTTCCCAAACTTTTTAAGGAAGAGAAAGTGGACCGGGTCTGTAATTTGGCTGCGCAAGCCGGTGTCCG TTACAGCATTGAAAATCCAGAGACCTACATTGATAGTAATATTGTGGGCTACCTGAATTTACTAGAGTGTTGCAGACACA ATAAAGTCGAACACTTAGTTTACGCCAGTAGCTCCAGTGTCTATGGTTTGAACGAAAAAATACCTTTTTCCACTTCAGAT AGTGTAGACCATCCGATAAGCCTGTATGCCGCAAGCAAAAAGAGTAATGAACTTATGGCCCACACCTATAGCCATTTGTT CGGGTTTGCAACCACGGGACTCCGATTTTTCACGGTATATGGCCCTTGGGGACGTCCCGACATGGCCCTGTTCCTGTTTA CCGATGCCATTGCCAAAGGCAATCCGATACAGGTATTCAACCATGGTAAGATGGAACGCGACTTTACCTATGTCGACGAT ATTGTTGAAGGGATTGTACGTGTACTCACCAAAACGGTTCGTAATAGGGATTTGTACGAAATCTATAATATCGGCAATAA TAATGCCGTTAAATTAACCGATTTTATAGAAGCCATCGAGAGCAGTATGGGGCAAAAAGCCACAAAAGAGTTGATGCCCA TGCAGCCAGGAGATGTTGAACGTACCTGGGCCGATGTAAATGACCTGATTAGGGACTACGACTACCAGCCCAATACCAGC GTAGTCGAAGGTGTCCAGAAATTTATTGAGTGGTATAAAAACTATTATAAAAAATAG Protein sequence : MKILVTGAAGFIGYHLCEKLLHQGFEVVGLDNINDYYDVNLKYDRLKQLGIERSDAQTFRKKCYGSIYGDKFSFVRMNLE DRDALPKLFKEEKVDRVCNLAAQAGVRYSIENPETYIDSNIVGYLNLLECCRHNKVEHLVYASSSSVYGLNEKIPFSTSD SVDHPISLYAASKKSNELMAHTYSHLFGFATTGLRFFTVYGPWGRPDMALFLFTDAIAKGNPIQVFNHGKMERDFTYVDD IVEGIVRVLTKTVRNRDLYEIYNIGNNNAVKLTDFIEAIESSMGQKATKELMPMQPGDVERTWADVNDLIRDYDYQPNTS VVEGVQKFIEWYKNYYKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-93 | 57 |
