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Name : kdsD (zobellia_2953) Accession : YP_004737379.1 Strain : Zobellia galactanivorans DsiJT Genome accession: NC_015844 Putative virulence/resistance : Virulence Product : arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 3434676 - 3435641 bp Length : 966 bp Strand : - Note : Arabinose 5-phosphate isomerase or Phosphoarabinoisomerase is involved in the lipopolysaccharide (LPS) biosynthesis; It catalyzes the interconversion of D-arabinose 5-phosphate and D-ribulose 5-phosphate; Contains a N-terminal SIS (Sugar ISomerase) domain DNA sequence : TTGAACGATAGCAAAGCTATTCTTGCGATAGCAAAAAAAACCATAGAAACCGAAAGTGCTTCCATCAATCATTTGGGCAC TTTATTGAACGAACAGTTCTCCGATGCCGTCAATTGCATTCTTGAATCTAAAGGAAGGGTCATTGTTTCGGGCATTGGCA AAAGCGCCATAATCGCGTCTAAAATCGTAGCCACCTTAAACTCCACAGGAACACCTGCCATTTTTATGCATGCCGGCGAT GCCATTCATGGTGACTTGGGCACTATCCAAGAAGAAGACGTGGTAATCTGTATCTCAAAAAGTGGTAGCACTCCTGAAAT TAAAATGTTGGTCCCCCTAATAAAACGGGGAACGAACAAGCTGATAGCCATGACGGGAAATATCGAGTCTTATTTGGCCA AGGAAGCACACTTTGTTCTCAACACTTATGTGGCCAAGGAAGCCTGCCCTAATAATTTGGCCCCTACGACCAGTACCACG GCACAACTGGTTATGGGAGATGCCCTGGCCATCTGTCTTTTAAAGATAAAAGGATTTAGCAGCAAGGATTTCGCCAAATA CCATCCTGGCGGATCTTTGGGCAAAAGGTTATACCTCAGGGTTTCCGATATTGTAGGCACGAACCAAAAACCCCAAGTAC CCATTGATGCGGACGTAAAAAAGGTCATTGTCGAGATCTCCGAAAAAATGTTGGGCGTTACGGCGGTTACCGAAGGTGAC GACATCGTAGGTATCGTGACCGATGGCGACATTAGGCGCATGCTCAACAAATACGATAACATAAGCGGCCTAACGGCGCG TGATATTATGACCTCCAACCCCAAGACCATTTCGGTAAACGTTTTGGCCATTGAAGCCTTGGAACTGATGCAAGAAAAGG GCATCTCACAATTATTGGGTGTAGACGGTAAAAAATATATGGGTGTTGTACATTTGCACAACTTGATCAACGAAGGTATA TTATAA Protein sequence : MNDSKAILAIAKKTIETESASINHLGTLLNEQFSDAVNCILESKGRVIVSGIGKSAIIASKIVATLNSTGTPAIFMHAGD AIHGDLGTIQEEDVVICISKSGSTPEIKMLVPLIKRGTNKLIAMTGNIESYLAKEAHFVLNTYVAKEACPNNLAPTTSTT AQLVMGDALAICLLKIKGFSSKDFAKYHPGGSLGKRLYLRVSDIVGTNQKPQVPIDADVKKVIVEISEKMLGVTAVTEGD DIVGIVTDGDIRRMLNKYDNISGLTARDIMTSNPKTISVNVLAIEALELMQEKGISQLLGVDGKKYMGVVHLHNLINEGI L |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 8e-45 | 44 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 3e-45 | 44 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 5e-45 | 44 |
