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Name : serS (zobellia_2133) Accession : YP_004736572.1 Strain : Zobellia galactanivorans DsiJT Genome accession: NC_015844 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase, class IIa Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2489545 - 2490816 bp Length : 1272 bp Strand : - Note : Seryl-tRNA synthetase is responsible for the attachment of serine to the 3' OH group of ribose of its cognate transfer RNA molecule (tRNA(Ser)) in a highly specific two-step reaction. It is a homodimer; Belongs to the class-IIa aminoacyl-tRNA synthetase; DNA sequence : ATGTTACAGCTACAGGTCGTTAGAGACAAAAAAGACGACATCATAAACGCATTGAAAAAGCGCAATATAGATGCCGCACC ATTGATTGATGAAGTATTGGAATTGGACGAAAAGAGACGTTCAACACAAACTGCTTTGGACAACACCTTGGCGGAAAGCA ATAAACTTTCCAAAGAAATAGGCATACTCTTTAAAACTGGCAAGGCCCAAGAAGCCAATGCCCTTAAAGAAAAGACAGGA ACCCTAAAGGAAGATTCGAAAAAGCTGGGCGAAGAACTCAACACCATTGCCGAAGAACTGCAAAGGGCCCTTTACCAAAT ACCCAATGTTCCGCACGAATCGGTACCTTCGGGCAATACGGACGAAGACAACGAAGAGGTCTTCAAAGAAGGTGAAATCC CCGTTTTGAACACCGATGCCCTTCCCCACTGGGAACTGGCAAAAAAATACGATATCATCGATTTTGAACTGGGCGTAAAA ATTGCCGGCGCCGGCTTTCCCGTTTACAAAGGAAAAGGTGCGCGCTTACAACGTGCCCTGATTTCCTATTTTCTCGATAA AAATACAGAAGCCGGTTATACCGAAATGCAAGTACCGCATTTGGTGAACGAAGCTTCCGGCTTTGGAACCGGACAGTTGC CCGACAAGGAAGGCCAAATGTACCACGTGGGAGAAGATGACCTATACCTCATCCCTACTGCGGAAGTACCGGTAACCAAC CTTTTTCGTGGCGAGATAGTCGCAGAAAGCGATTTTCCTATTTGCTATACCGCCTACACCCCTTGTTTTAGAAGGGAAGC CGGAAGTTATGGAGCGCATGTTCGCGGCCTGAACCGCCTGCACCAATTCGACAAGGTTGAAATTGTCCGCGTAGAAAATC CGGCCAATTCGTACCACGCCTTGGATGGCATGGTAGAACACGTAAAAAATATACTTAGGGAACTCAAATTACCTTACCGC ATCCTTAGGCTTTGTGGCGGTGACCTAGGTTTTACCTCGGCCCTTACCTATGATTTTGAAGTCTTCTCGACGGCGCAAGA CCGATGGCTGGAAATCAGTTCGGTATCTAATTTTGAAACCTATCAGGCCAACCGATTAAAGCTTCGCTATAAAGACGAAA ACGGAAAAAGCCAACTGGCACACACCCTAAACGGAAGTTCCTTGGCCCTACCCCGGGTTTTAGCGGGAATTTTGGAAAAC TACCAAACTCCCGACGGAATTCAGATTCCCGAAGTTTTGGTGCCTTATTGCGGATTTGACCGTATAGACTAA Protein sequence : MLQLQVVRDKKDDIINALKKRNIDAAPLIDEVLELDEKRRSTQTALDNTLAESNKLSKEIGILFKTGKAQEANALKEKTG TLKEDSKKLGEELNTIAEELQRALYQIPNVPHESVPSGNTDEDNEEVFKEGEIPVLNTDALPHWELAKKYDIIDFELGVK IAGAGFPVYKGKGARLQRALISYFLDKNTEAGYTEMQVPHLVNEASGFGTGQLPDKEGQMYHVGEDDLYLIPTAEVPVTN LFRGEIVAESDFPICYTAYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRVENPANSYHALDGMVEHVKNILRELKLPYR ILRLCGGDLGFTSALTYDFEVFSTAQDRWLEISSVSNFETYQANRLKLRYKDENGKSQLAHTLNGSSLALPRVLAGILEN YQTPDGIQIPEVLVPYCGFDRID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-75 | 45 |
