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Name : texA (zobellia_2096) Accession : YP_004736535.1 Strain : Zobellia galactanivorans DsiJT Genome accession: NC_015844 Putative virulence/resistance : Unknown Product : transcriptional accessory protein Tex Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 2442554 - 2444677 bp Length : 2124 bp Strand : - Note : The protein Tex is a transcriptional accessory protein, but its exact function is not known. Contains a central RNAse H-like domain and a C-terminal S1 RNA binding domain; Localized in the cytoplasm; High confidence in function and specificity DNA sequence : ATGCAACTCATTCCCTTTCTCTCCAAACACACCCAACTCCCTCAAAAGAGTATTGAGAATACCGTGGAACTTCTGAACGA AGATTGTACCGTACCCTTTATCTCTCGCTATCGAAAAGAACGAACGGGCAATCTAGACGAGGTACAGATTGGGGCCATAG TACAGTTCAAGGCACAGTTCGAGGCTCTTGAAAAGCGAAAAACGGCAGTCATAAAGGCTATTGAAGAGCAAAATGCCCTG ACCGACGAACTTCGCCTCAAGATAGAACAGACCGACGAACTCGTTACGCTTGAAGACCTATACCTCCCGTTCAAGAAGAA ACGAAAGACCAAGGCGGAAACCGCCCGGAAAAACGGACTAGAACCCCTTGCTAAAATCATTATGGCCCAAAACCATAACG ATATTGAATCGGCAGCCCTACAATATACCAACAATGAAGTCGCCGATGCGGACGAAGCCCTTGAAGGGGCCCGGCATATC ATTTCCGAGTGGATCAACGAACGTATCTCGGTAAGAAACCAAGTGCGTAATCAATTGGAACGCAGTGCCCTGATCGTCAC AAAGGTTATCTCTACCAAAAAAGACGAAGAAAAAGCACAAAAGTTCCGCGATTACTTTGATTGGAGCGAAGCTTTAAAAC GTTGTCCCTCACACCGGTTATTGGCCATTTTACGTGCCGAAAACGAGGGTTTTATCCGCGTTAAGATAGAAATCGACTCC GACGAAATGCTTCGGCGTATCGAAGATCGCATCATAAAATCCAATAATTCGTGTACGCCCCAAATACAACTGGCCATTGC CGATGCGTACAAACGCCTACTTTTTCCCTCCTTGTCGAATGAAATCCTCAAAAACGCCAAGGAAAAGGCAGACGACGACG CCATCAAGGTATTCAGCAAGAACCTAAAACAATTATTGCTCGGGGCTCCCCTAGGGGAAAAACGCATCCTGGCAATAGAC CCCGGCTTCCGAACCGGCTGTAAGATCGTATGTTTGAGCGCCCAGGGAGAGCTCGAACACAATGAGACCATCTATCCGCA TCCGCCTCAGAACAAGAGTTCAGAGGCCATAAAAAAAATCAGTTCGCTTTGCGATGCCTACAAAATAGAGGCCATTGCCA TTGGCAACGGAACGGCTTCAAGGGAGACCGAACACTTGGTTAAGCGCATCCATTTCAAAAACCCTATGGAGGTTTTTATA GTGAGCGAAGCCGGAGCTTCAATTTATTCCGCCTCAAAAATCGCCCGTGACGAATTCCCTAATTACGATGTTACCGTTAG GGGTGCCATTTCCATAGGAAGGCGACTCGCCGACCCCTTGGCAGAACTGGTGAAAATAGACCCCAAATCTATCGGTGTCG GACAGTACCAGCACGATGTAGACCAAGGAAAACTTCAGACCTCATTGGATAGCGTAGTGGAAAGCTGCGTAAATTCGGTT GGGGTAAACATCAATACGGCCAGTGTACCCTTATTGAGCTACGTATCCGGTATCGGGCCGAAACTCGCGGAAAACATTGT CGCCTATCGCAATGAAAACGGAGCGTTCAAAAGTAGGACCGACATTAAAAAAGTAGCCCGGCTCGGCGGAAAGGCTTTTG AACAAGGAGCTGCCTTCCTGCGGATAAAAGATGCCAAAAACCCCTTAGATGACTCTGCCGTTCACCCCGAGAGCTATACC ATTGTCCAAAAAATCGCAAAGGACCAAGGCATACCCGTCACCGAATTGATAGGAAACAGCAAGGCCCTAAAGAGTGTGGA CCTACAAGCGTATTGTACCGAAACTATCGGCTTACCTACGTTAAAGGATATTGTAGAAGAACTTGAAAAACCCGGCCTTG ACCGTCGTGAAAAAGCGAAGGTTTTTACTTTTGACCAAAATATAAAAACGATATCCGATTTGAGGGAAGGCCAGTTGTTG CCCGGCATTGTCAACAACATTACCAATTTCGGGTGTTTTGTCGACATAGGAATCAAGGAAAGTGGTCTTATCCACGTATC GAACCTATCGGATACTTTTGTTAAAGACGTAAATGCACATGTGAGCCTGCACGAGCAGATTATAGTAAAAGTACTGCAAG TGGATGTGCCCCGAAAACGCATTCAGCTAAAGCTGCACAAATAA Protein sequence : MQLIPFLSKHTQLPQKSIENTVELLNEDCTVPFISRYRKERTGNLDEVQIGAIVQFKAQFEALEKRKTAVIKAIEEQNAL TDELRLKIEQTDELVTLEDLYLPFKKKRKTKAETARKNGLEPLAKIIMAQNHNDIESAALQYTNNEVADADEALEGARHI ISEWINERISVRNQVRNQLERSALIVTKVISTKKDEEKAQKFRDYFDWSEALKRCPSHRLLAILRAENEGFIRVKIEIDS DEMLRRIEDRIIKSNNSCTPQIQLAIADAYKRLLFPSLSNEILKNAKEKADDDAIKVFSKNLKQLLLGAPLGEKRILAID PGFRTGCKIVCLSAQGELEHNETIYPHPPQNKSSEAIKKISSLCDAYKIEAIAIGNGTASRETEHLVKRIHFKNPMEVFI VSEAGASIYSASKIARDEFPNYDVTVRGAISIGRRLADPLAELVKIDPKSIGVGQYQHDVDQGKLQTSLDSVVESCVNSV GVNINTASVPLLSYVSGIGPKLAENIVAYRNENGAFKSRTDIKKVARLGGKAFEQGAAFLRIKDAKNPLDDSAVHPESYT IVQKIAKDQGIPVTELIGNSKALKSVDLQAYCTETIGLPTLKDIVEELEKPGLDRREKAKVFTFDQNIKTISDLREGQLL PGIVNNITNFGCFVDIGIKESGLIHVSNLSDTFVKDVNAHVSLHEQIIVKVLQVDVPRKRIQLKLHK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 3e-144 | 48 |
