|
Name : ssb2 (zobellia_2048) Accession : YP_004736487.1 Strain : Zobellia galactanivorans DsiJT Genome accession: NC_015844 Putative virulence/resistance : Unknown Product : single-stranded DNA-binding protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0629 EC number : - Position : 2385617 - 2385949 bp Length : 333 bp Strand : + Note : Single-stranded DNA-binding protein (SSB) is essential for replication of the chromosome. It is also involved in DNA recombination and repair. This protein forms a homotetramer. Localized in the cytoplasm.; High confidence in function and specificity DNA sequence : ATGAACGCCTTAAAAAACAAAGTACAGTTGATTGGAAACTTGGGCCAAGACCCAGAAATTGTAAACATGGACAATGGCAA TAAACTGGCCAAATTTTCCATAGCTACTACGGAAACTTATAAAAACGCCCAGGGTGAGCGTGTAGACGATACCCAATGGC ACAATGTGGTGGCCTGGGGAAAGACGGCCGAAATCGTAGAAAATTATTTGACCAAGGGAAAACAGGTGGCCGTAGAGGGC AAGCTCACCCACCGCTCGTACGAGACCAAGGAGGGTGAAAAACGATATATTACCGAAGTACGTTGTAACGAACTTTTGAT GTTGGGTAAATAG Protein sequence : MNALKNKVQLIGNLGQDPEIVNMDNGNKLAKFSIATTETYKNAQGERVDDTQWHNVVAWGKTAEIVENYLTKGKQVAVEG KLTHRSYETKEGEKRYITEVRCNELLMLGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAOV_0290 | YP_005735807.1 | Single-stranded DNA-binding protein, phage associated | Not tested | ¥ÕSa1 | Protein | 3e-16 | 43 |
| SAOV_1956c | YP_005737400.1 | Single-stranded DNA-binding protein, phage associated | Not tested | ¥ÕSa3 | Protein | 9e-15 | 42 |
| SAOV_1081 | YP_005736576.1 | ssDNA-binding protein | Not tested | ¥ÕSa2 | Protein | 6e-16 | 41 |
| SAV0864 | NP_371388.1 | ssDNA-binding protein | Not tested | ¥ÕSa1 | Protein | 4e-16 | 41 |
