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Name : araD (zobellia_1999) Accession : YP_004736439.1 Strain : Zobellia galactanivorans DsiJT Genome accession: NC_015844 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0235 EC number : 5.1.3.4 Position : 2333813 - 2334517 bp Length : 705 bp Strand : + Note : L-ribulose-5-phosphate 4-epimerase catalyzes the conversion of L-ribulose 5-phosphate into D-xylulose 5-phosphate. This is the third step of the L-arabinose catabolism. AraD belongs to the class II aldolase. Binds one zinc ion by subunit. Localized in the DNA sequence : ATGGGTAAGTATACATCGTTAAAAGAAGAGGCCTATGCGGCCAATATGCAATTGCCCGAATTGGGGCTGGTACTCTTTAC CTTTGGCAATGCGAGTGCCGTTGATAGGGATAAGGGCGTGTTCGCCATAAAGCCTAGTGGTGTACCCTACGCCGAACTAA CGGTCGAGGATATGGTCATTTGCGATTTTGATGCCAAGATCGTGGAGGGTAAAATGCGACCTTCCTCCGATACCAAGACC CACGCCGTTCTTTACAAGGAATGGGATAAAATTGGGGGGGTGGTTCATACACATTCCACTTATGGGACCGCTTGGGCACA GGCCCTGCGTGATATTCCTATTTTTGGGACGACCCATGCCGACCATTTAATTTCAGATATTCCTTGTGCGCCACCCATGA AAGACGAGTATATTGCAGGTGATTATGAACATATGACGGGCTATCATATTATCGATTGCCTAAAGGAAAGGGGTCTCGAC TATAACGAGATCGGTATGATACTGGTAGGGAGCCATGCCCCGTTTACCTGGGGTGCGACCGTAGCCAAGGCGGTTTATAA TAGTGCCGTATGTGAGGAAGTGGCCAAAATGGCCCATTTGACCTTGCAGATAAATCCGAACGCGTCCCCTTTGAAGGAGG CCTTGAAAAAGAAGCATTTTGAGCGTAAACACGGTAAGGATGCCTATTACGGACAAGGCTGTTGA Protein sequence : MGKYTSLKEEAYAANMQLPELGLVLFTFGNASAVDRDKGVFAIKPSGVPYAELTVEDMVICDFDAKIVEGKMRPSSDTKT HAVLYKEWDKIGGVVHTHSTYGTAWAQALRDIPIFGTTHADHLISDIPCAPPMKDEYIAGDYEHMTGYHIIDCLKERGLD YNEIGMILVGSHAPFTWGATVAKAVYNSAVCEEVAKMAHLTLQINPNASPLKEALKKKHFERKHGKDAYYGQGC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 4e-49 | 52 |
