Gene Information

Name : pykA (zobellia_1594)
Accession : YP_004736037.1
Strain : Zobellia galactanivorans DsiJT
Genome accession: NC_015844
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 1890751 - 1892181 bp
Length : 1431 bp
Strand : +
Note : Pyruvate kinase (PK) catalyzes the final step in glycolysis (Embden-Meyerhof pathway), the conversion of phosphoenolpyruvate to pyruvate with concomitant phosphorylation of ADP to ATP. PK forms a homotetramer and requires both magnesium and potassium ions

DNA sequence :
ATGCCAAGTAACAAAAAGACAAAAATCGTTGCCACCCTAGGGCCGGCCACGAGCAAAAAGGAAGTGCTGAGAGATATGAT
GGAAGCCGGCGTAGATGTCTTTCGCATTAATTTTTCACATGCCGATTATAACGACGTTACCGAACGTATAAAAATGATTA
GGGAACTCAATGAAGAAACAGGTAGAAACACCTCTATTCTGGCCGATTTACAAGGCCCGAAACTTAGGGTCGGTGTTATG
GCCAGTGAAGTCGTTGTAGCCCCTGGAGACGAAATTACCTTTGTTACGGGCGAACCTTTTGAAGGTACCGCCGAAAGGGT
ATATATGAACTATGATGCTTTTCCTCAAGACGTCAAGCCCGGTGAGCGTATTTTGTTAGACGACGGAAAGTTGATGTTCG
AAGTCATAACCACTGACGGAAAGGAGCAAGTAAAAACCAAGGTTATACAAGGAGGACCTTTGCGGTCTAAAAAAGGCGTA
AACCTTCCCAATACAAATATCTCTTTACCCGCCTTGACCGAAAAAGACGTAAAAGATGCCATTTTTGCCATTTCGCAAAA
TGTCGATTGGATCGCGCTTTCCTTCGTCCGTTTTAGCCAAGACCTTATTGATCTTCAAGCGATCATTAAAGAACATACAG
ACGTAAAAATTCCGATCATCGCGAAAATCGAAAAACCGGAAGCCGTTGAAAACATAGACAAAATCGTTGCCTATTGCGAC
GGACTAATGGTAGCCCGTGGCGACTTAGGTGTTGAAGTTCCTGCCCAAGAGGTTCCATTAATTCAGAAACAATTGGTGCT
TAGGGCCAAAAAAGCCCGTATCCCCGTAATAATCGCCACCCAAATGATGGAAACGATGATTACCAGCCTTACACCGACAC
GTGCAGAGGTGAACGATGTAGCCAACTCCGTAATGGACGGTGCCGATGCCGTGATGCTCTCTGGGGAAACCTCAGTGGGG
AATTACCCGGTACAGGTTATCGAAAAAATGAGCAGTATCCTTCAAAGTGTAGAAAGCTCTGAACTTATTCAAGTACCACA
CGATCCACCACATATCCGTACAAAAAGATATATTACAAAGTCGATTTGTTACCATGCCGCAATTATGGCCAATGAAATCA
AGGCCAAGGCCATCTCTACATTGACCAATAGTGGGTATACGGCCTTTCAAATCTCGGCTTGGCGACCTAGTGCACACATT
TTGGTGTTTACCTCAAACAAACGTATACTTACGCAATTGAACCTTTTATGGGGCGTGCGTGCCTTTTATTATGACAAATA
CGTATCTACCGATCAAACGATCGAAGACGTGAACAAAATGGCATGTGATAAAGGCCTTTTAGAAACTGGAGATATGCTTA
TCAGTTTGGCGGCAATGCCGATCAAAGACAAAGGTATGGTCAACACGCTAAGGGTGACAGAAATAGAATAA

Protein sequence :
MPSNKKTKIVATLGPATSKKEVLRDMMEAGVDVFRINFSHADYNDVTERIKMIRELNEETGRNTSILADLQGPKLRVGVM
ASEVVVAPGDEITFVTGEPFEGTAERVYMNYDAFPQDVKPGERILLDDGKLMFEVITTDGKEQVKTKVIQGGPLRSKKGV
NLPNTNISLPALTEKDVKDAIFAISQNVDWIALSFVRFSQDLIDLQAIIKEHTDVKIPIIAKIEKPEAVENIDKIVAYCD
GLMVARGDLGVEVPAQEVPLIQKQLVLRAKKARIPVIIATQMMETMITSLTPTRAEVNDVANSVMDGADAVMLSGETSVG
NYPVQVIEKMSSILQSVESSELIQVPHDPPHIRTKRYITKSICYHAAIMANEIKAKAISTLTNSGYTAFQISAWRPSAHI
LVFTSNKRILTQLNLLWGVRAFYYDKYVSTDQTIEDVNKMACDKGLLETGDMLISLAAMPIKDKGMVNTLRVTEIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 6e-65 41
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 4e-64 41
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 3e-64 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 3e-64 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pykA YP_004736037.1 pyruvate kinase VFG0479 Protein 1e-64 41