|
Name : hpcH (SBG_0952) Accession : YP_004729835.1 Strain : Salmonella bongori NCTC 12419 Genome accession: NC_015761 Putative virulence/resistance : Unknown Product : 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG3836 EC number : 4.1.2.- Position : 1060241 - 1061032 bp Length : 792 bp Strand : + Note : - DNA sequence : ATGAAAAATGCTTTCAAAGACGCGTTAAAAGCGGGGCGTCCGCAAATTGGGTTATGGCTGGGACTGACCAGCAGTTACAG CGCCGAACTGTTAGCGGGTGCCGGATTCGACTGGCTACTGATCGACGGTGAACACGCGCCGAATCATGTGCAGACGGTGT TAACCCAGTTGCAGGCAATTGCGCCATACCCCAGCCAACCGGTGGTGCGCCCGTCATGGAGCGACGCGGTGCAGATTAAG CAATTACTGGATATCGGCGCGCAAACACTGCTGGTGCCGATGGTACAGAACGCCGATGAAGCGCGCGCCGCTGTAGCGGC CACGCGTTATCCCCCAGCCGGGATTCGAGGCGTCGGCAGCGCGTTGGCGCGGGCTTCTCGCTGGAATCGTATTCCGGACT ATCTCCAGCAGGCCAACGAGGCGATGTGCGTACTGGCGCAGCTTGAAACCCGCGAAGCGATGAATAACCTGGCGTCGATC CTCGATGTTGACGGCGTCGATGGCGTGTTTATCGGCCCGGCGGATCTCAGCGCCGATATGGGCTTTGCCGGTAATCCTCA ACACCCGGAAGTGCAGGCGGTGATAGAGACGGCCATCATGCAAATTCGCGCCGCAGGCAAAGCGCCGGGGATTTTGATGG CCAATGAACCGCTGGCGAAACGTTATCTGGAACTTGGCGCGCTGTTTGTAGCTGTCGGCGTCGATACCACTCTGCTGGCG CGCGGTGCAGAGACGTTGGCGTCGCGCTTTGGCGCGGCGAAACGCTCGCCCGGTTCGCCCGGCGTTTATTAA Protein sequence : MKNAFKDALKAGRPQIGLWLGLTSSYSAELLAGAGFDWLLIDGEHAPNHVQTVLTQLQAIAPYPSQPVVRPSWSDAVQIK QLLDIGAQTLLVPMVQNADEARAAVAATRYPPAGIRGVGSALARASRWNRIPDYLQQANEAMCVLAQLETREAMNNLASI LDVDGVDGVFIGPADLSADMGFAGNPQHPEVQAVIETAIMQIRAAGKAPGILMANEPLAKRYLELGALFVAVGVDTTLLA RGAETLASRFGAAKRSPGSPGVY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaI | AAO17185.1 | HpaI | Not tested | tcd island | Protein | 1e-87 | 74 |
