Gene Information

Name : hpcR (SBG_0946)
Accession : YP_004729829.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Resistance
Product : homoprotocatechuate degradative operon repressor
Function : -
COG functional category : K : Transcription
COG ID : COG1846
EC number : -
Position : 1054639 - 1055079 bp
Length : 441 bp
Strand : -
Note : -

DNA sequence :

ATGCATGATTCATTAACCATCGCACTGCTTCAGGCGCGCGAAGCGGCAATGACCTACTTCCGCCCCATCGTTAAAAGCCA
CAATCTGACCGAGCAGCAATGGCGCATTGTGCGGATACTGGCTGAAAGTCCATCCATAGATTTTCACGATCTGGCCTTTC
GGAGCTGTATCCTGCGGCCAAGTCTGACGGGAATATTGACGCGTATGGAACGAGACGGGTTGGTGTTGCGATTAAAACCG
GTGAACGATCAACGCAAACTTTATGTCATGCTGACACCTCAGGGGCAAACGTTGTATGCCCACGCCCGGACGCAGGTAGA
AGAGGCTTATCGAAAAATTGAGGCGGACTTTACACCTGGGAAAATGCAGCAATTGATGTTGCTGTTGGACGATCTTATTG
CCCTTGGAGGCCAGCACACTGATGGCGAAGACGACGCATAG

Protein sequence :

MHDSLTIALLQAREAAMTYFRPIVKSHNLTEQQWRIVRILAESPSIDFHDLAFRSCILRPSLTGILTRMERDGLVLRLKP
VNDQRKLYVMLTPQGQTLYAHARTQVEEAYRKIEADFTPGKMQQLMLLLDDLIALGGQHTDGEDDA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
hpcR	AAO17176.1	HpcR	Not tested	tcd island	Protein	2e-43	68

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
hpcR	YP_004729829.1	homoprotocatechuate degradative operon repressor	BAC0505	Protein	6e-33	56