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Name : serS (SBG_0819) Accession : YP_004729705.1 Strain : Salmonella bongori NCTC 12419 Genome accession: NC_015761 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 921254 - 922546 bp Length : 1293 bp Strand : + Note : - DNA sequence : ATGCTCGATCCCAATCTGCTGCGTAATGAGCCAGACGCAGTCGCTGAAAAACTGGCACGCCGGGGCTTTAAGCTGGATGT AGATAAGCTGCGCGCTCTTGAAGAGCGTCGTAAAGTTTTGCAGGTCAACACGGAAAACCTGCAGGCAGAGCGTAATTCAC GATCGAAATCCATTGGCCAGGCGAAAGCGCGCGGGGAAGATATCGAGCCTTTACGCCAGGAAGTGAATAAACTGGGCGAA GCGCTGGATGCGGCGAAAGCCGAGCTAGATACCTTGCTGGCGGAGATCCGCGATATTGCGCTGACTATTCCAAACCTGCC GGCGGATGAAGTACCGGTGGGTAAAGATGAAAACGACAACGTTGAAGTCAGCCGTTGGGGTACCCCGCGTGAGTTTGATT TTGAAGTTCGCGATCATGTCACTTTAGGTGAAATGCATTCTGGCCTCGACTTTGCCGCTGCGGTTAAGCTGACCGGCTCC CGTTTTGTGGTCATGAAAGGACAGATTGCGCGTATGCATCGCGCATTATCGCAGTTCATGCTGGATCTGCATACGGAGCA GCATGGCTATAGCGAGAACTACGTGCCGTATCTGGTTAACCACGACACGCTGTATGGCACTGGTCAATTGCCGAAATTCG CAGGTGACCTGTTCCACACCCGTCCGCTGGAAGAAGAAGCCGACAGCAGCAACTATGCCTTGATTCCGACGGCAGAAGTC CCGCTGACCAACCTGGTGCGCGATGAAATCATCGACGAAGACCAGTTGCCGATTAAAATGACGGCGCATACGCCATGCTT CCGTTCTGAAGCAGGGTCTTATGGCCGTGATACCCGAGGTCTGATCCGTATGCACCAGTTCGACAAAGTTGAGATGGTGC AGATCGTTCGCCCGGAAGATTCCATGGCTGCGCTGGAGGAGATGACCGGCCATGCGGAAAAAGTGCTCCAGCTACTGGGA CTGCCGTACCGTAAAATCATTCTGTGCACCGGCGATATGGGCTTCGGCGCCTGCAAAACTTATGATCTTGAAGTCTGGGT TCCGGCGCAGAATACCTACCGCGAGATCTCTTCCTGCTCTAACGTCTGGGATTTCCAGGCGCGCCGTATGCAGGCACGTT GCCGCAGCAAGTCCGACAAAAAGACTCGCCTGGTGCATACCCTGAACGGTTCCGGGCTGGCCGTAGGCCGTACCCTGGTG GCGGTAATGGAAAACTATCAGCAGGCTGATGGCCGTATTGAAGTGCCGGAAGTACTACGTCCGTACATGAACGGGCTGGA ATTTATCGGCTAA Protein sequence : MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVNTENLQAERNSRSKSIGQAKARGEDIEPLRQEVNKLGE ALDAAKAELDTLLAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGS RFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTAEV PLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLG LPYRKIILCTGDMGFGACKTYDLEVWVPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLV AVMENYQQADGRIEVPEVLRPYMNGLEFIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 9e-108 | 56 |
