|
Name : kdpB (SBG_0595) Accession : YP_004729494.1 Strain : Salmonella bongori NCTC 12419 Genome accession: NC_015761 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase B chain Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 670534 - 672582 bp Length : 2049 bp Strand : - Note : - DNA sequence : ATGAGTCGCAAGCAACTGGCGCTGTTCGAACCTGTTTTGCTCGTACAGGCGCTAACGGATGCAGTAAAAAAACTCAGCCC ACGCGCCCAGTGGCGTAACCCGGTGATGTTTGTGGTCTGGGTCGGTAGCGTGTTAACCACGCTATTAACGCTCGCCATGC TAACAGGCCAACTGGCAGGAAACACATTGTTCACTGGCGCTATCAGCCTGTGGCTATGGTTCACCGTCCTGTTCGCTAAT TTTGCCGACGCGCTGGCGGAAGGTCGCAGCAAAGCCCAGGCAAATAGCCTAAAAGGGGTGAAAAAGATGGCGTTCGCTCG CCGTCTGCGCGCCCCACGCCATGATGCGCAGGCGGACAACGTGCCTGCCGCTGAACTGCGTAAAGGCGATATTGTGCTGG TCAAGGCGGGCGATATTATTCCCTGTGATGGTGAGGTGATCGAAGGCGGCGCGTCGGTGGATGAAAGTGCAATTACCGGC GAATCAGCGCCCGTGATCCGCGAATCCGGCGGCGATTTCGCCTCGGTAACCGGCGGCACGCGAGTGCTCTCCGACTGGCT GGTGATTACGTGCAGCGTGAATCCTGGCGAAACCTTTCTTGACCGAATGATCGCGATGGTGGAAGGCGCCCAGCGGCGGA AAACGCCTAATGAAGTCGCCCTGACAATTCTGCTCATTGCCCTGACCATTGTCTTTTTACTGGCGACCGCCACCCTGTGG CCCTTCTCCGCCTGGGGCGGTAACGCGGTCAGCGTCACCATACTGGTCGCACTGTTGGTCTGCCTTATCCCAACGACCAT CGGCGGATTGCTTTCCGCCATTGGCGTCGCCGGAATGAGCCGGATGCTGGGCGCGAATGTAATCGCCACCAGCGGCCGCG CTGTAGAAGCCGCAGGCGATGTCGACGTGCTGCTGCTGGATAAAACCGGCACTATCACGCTCGGCAACCGTCAGGCGTCC GATTTTATTCCCGCCCGGGGCGTGGACGAGCGCACCCTGGCCGACGCCGCGCAGCTCGCTTCACTGGCCGACGAAACACC GGAAGGCCGTAGCATTGTTGTCCTTGCCAAACAGCGCTTTAATCTACGCGAGCGCGATGTACAGGCGCTTCATGCTACCT TTGTTCCGTTCACCGCGCAAAGCCGCATGAGTGGCATTAATATTGATAACCGGATGATCCGTAAAGGTTCGGTAGATGCC ATTCGTCGTCATGTCGAAAGCAATGGCGGCTATTTCCCTGCCGATGTGGAGCAAAACGTCGAGAACGTGGCACGTCTTGG CGCGACGCCGCTGGTGGTGGTGGAAGGTGCGCGCGTGCTGGGCGTCATTGCGCTTAAGGATATCGTCAAAGGCGGCATTA AAGAGCGCTTCGCCCAGCTACGCAAGATGGGCATCAAAACGGTGATGATCACTGGCGATAACCGCCTGACGGCGGCAGCG ATTGCCGCCGAAGCCGGTGTGGACGATTTTCTTGCCGAAGCCACGCCGGAAGCCAAGCTGGCGCTGATCCGTCAATATCA GGCGGAAGGACGGCTGGTCGCCATGACTGGCGACGGCACTAACGATGCCCCGGCGCTGGCGCAGGCTGACGTCGCGGTGG CGATGAACTCAGGCACCCAGGCGGCAAAAGAAGCCGGTAATATGGTGGATTTGGACTCTAACCCGACCAAGTTGATTGAA GTGGTGCATATTGGTAAACAGATGCTGATGACGCGCGGCTCGCTCACCACCTTCAGTATCGCTAACGATGTGGCGAAATA TTTCGCCATTATTCCCGCCGCGTTTGCCGCTACTTACCCACAGTTGAACACGCTCAACGTAATGGGGCTGCATTCGCCGA ACTCCGCCATTCTGAGCGCGGTGATTTTTAACGCCTTGATTATTATTTTCCTGATCCCGCTGGCATTAAAGGGCGTGAGT TATAAGCCGCTTTCCGCATCAGCTATGCTGCGCCGTAATTTATGGATCTATGGTCTGGGTGGCCTGGTGGTGCCGTTTAT TGGCATTAAAGTGATTGATATCCTGCTGACCCTGCTGGGTCTGGTGTGA Protein sequence : MSRKQLALFEPVLLVQALTDAVKKLSPRAQWRNPVMFVVWVGSVLTTLLTLAMLTGQLAGNTLFTGAISLWLWFTVLFAN FADALAEGRSKAQANSLKGVKKMAFARRLRAPRHDAQADNVPAAELRKGDIVLVKAGDIIPCDGEVIEGGASVDESAITG ESAPVIRESGGDFASVTGGTRVLSDWLVITCSVNPGETFLDRMIAMVEGAQRRKTPNEVALTILLIALTIVFLLATATLW PFSAWGGNAVSVTILVALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGDVDVLLLDKTGTITLGNRQAS DFIPARGVDERTLADAAQLASLADETPEGRSIVVLAKQRFNLRERDVQALHATFVPFTAQSRMSGINIDNRMIRKGSVDA IRRHVESNGGYFPADVEQNVENVARLGATPLVVVEGARVLGVIALKDIVKGGIKERFAQLRKMGIKTVMITGDNRLTAAA IAAEAGVDDFLAEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLIE VVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNTLNVMGLHSPNSAILSAVIFNALIIIFLIPLALKGVS YKPLSASAMLRRNLWIYGLGGLVVPFIGIKVIDILLTLLGLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 3e-165 | 63 |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 3e-165 | 63 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-137 | 57 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-137 | 57 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-137 | 57 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-137 | 57 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 4e-138 | 57 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 9e-138 | 57 |
