Gene Information

Name : kdpE (SBG_0592)
Accession : YP_004729491.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : KDP operon transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 666586 - 667263 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence :
GTGACGAACGTTCTGATTGTTGAAGATGAACAGGCCATCCGCCGCTTTCTGCGCGCCGCGCTGGAAGGCGACGGTCTGCG
CGTGTATGAGGCGGAAACATTACAACGCGGTTTACTGGAAGCCGCCACGCGAAAGCCCGATCTGATTATTCTCGACCTCG
GCCTGCCAGACGGTGACGGTATCGATTTCATTCGCGACCTGCGTCAGTGGAGCGCGATACCCATTATTGTGCTTTCCGCC
CGTAGCGAAGAGAGTGATAAGATTGCCGCGCTTGATGCCGGGGCTGACGATTACCTGAGCAAGCCGTTCGGCATTGGCGA
GCTACAGGCGCGTTTACGTGTAGCGCTAAGACGGCACACCGCCAGCCCTTGCGCCGATCCTGTCGTCCGCTTTTCCAACG
TGACGGTCGATCTCGCCGCACGCGTGATCCACCGTGGCGACGAAGAAATCCATCTGACGCCGATTGAGTTCCGCCTGCTG
GCGGTATTACTCAATAATGCCGGCAAGGTATTAACCCAACGGCAGTTATTAAACCAGGTCTGGGGCCCTAACGCCGTGGA
GCATAGCCACTATTTGCGCATCTATATGGGGCATTTACGCCAGAAACTGGAACAAGATCCCACCCGCCCACGCCACTTTA
TTACCGAGACCGGCATTGGCTATCGCTTTATGCCATGA

Protein sequence :
MTNVLIVEDEQAIRRFLRAALEGDGLRVYEAETLQRGLLEAATRKPDLIILDLGLPDGDGIDFIRDLRQWSAIPIIVLSA
RSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHTASPCADPVVRFSNVTVDLAARVIHRGDEEIHLTPIEFRLL
AVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPTRPRHFITETGIGYRFMP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 1e-24 42
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 2e-24 42
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 2e-24 42
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 2e-24 42
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 2e-24 42
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 2e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE YP_004729491.1 KDP operon transcriptional regulator VFG1390 Protein 5e-28 41