Gene Information

Name : fepD (SBG_0500)
Accession : YP_004729401.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : ferric enterobactin transport protein FepD
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 567214 - 568221 bp
Length : 1008 bp
Strand : -
Note : -

DNA sequence :
ATGTCATCGTCGTTTTCCGTGACGCGCGCGTTTGCCGTGCCCGGATTGCTGTTATTGTTGATTCTCGCGACAGTTTTAAG
TCTGGTCATTGGTGCGAAACCCTTGCCCGCCGCTGTCGTGCTGGACGCGTTCACTGGCGTTTGCCAAAGCGCCGATTGCA
CCATCGTCCTGGATGCGCGTTTGCCTCGTACGCTGGCCGGACTACTGGCAGGCGGCGCGTTGGGACTCGCCGGCGCGCTG
ATGCAAACGCTTACCCGTAACCCGCTCGCCGATCCAGGGATTCTGGGCGTTAACCACGGCGCCAGCTTCGCCATTGTTCT
GGGCGCGGCGCTGTTCGGTTTCTCCACACCGCTGGAACAGCTTTTCATGGCCTTTAGCGGCGCGCTTATCGCATCGCTGA
TTGTCGCCTTTACCGGCAGTCAGGGCGGCGGCCAGTTGAGCCCGGTCCGCCTGACACTGGCTGGCGTGGCGCTTGGCGCA
GTCCTGGAAGGACTGACCAGCGGTATCGCGCTGTTAAATCCAGAGGTCTACGACCAGCTTCGCTTCTGGCAGGCAGGTTC
GCTGGATATTCGCAGCCTGCAAACATTGAAAGTGGTCATCGCGCCCGTCGCCATCGCCGGGATCGTAGCCCTATTTCTGA
GCCGCGCACTGAACAGTCTGAGCCTTGGCAGCGATACCGCAACGGCGCTGGGCAGTAAAGTGGCGCGAACCCAGCTTATC
GGTTTACTGGCGATCACCGTCTTGTGCGGCAGCGCAACGGCGTTGGTCGGCCCTATCGCCTTCATCGGTCTGATGATGCC
GCATATGGCACGCTGGCTGGTGGGCGCTGACCACCGCTGGTCGCTGCCGGTGACGCTATTGTCGACCCCTGCCCTGCTGC
TTTTCGCCGATATTATTGGCCGCCTGATAGTGCCTGGCGAACTCCGCGTCTCGGTCGTCAGTGCATTTATCGGCGCGCCG
GTACTTATTTTTCTGGTACGCCGAAAATCAGGCGGAGGCAGCTTATGA

Protein sequence :
MSSSFSVTRAFAVPGLLLLLILATVLSLVIGAKPLPAAVVLDAFTGVCQSADCTIVLDARLPRTLAGLLAGGALGLAGAL
MQTLTRNPLADPGILGVNHGASFAIVLGAALFGFSTPLEQLFMAFSGALIASLIVAFTGSQGGGQLSPVRLTLAGVALGA
VLEGLTSGIALLNPEVYDQLRFWQAGSLDIRSLQTLKVVIAPVAIAGIVALFLSRALNSLSLGSDTATALGSKVARTQLI
GLLAITVLCGSATALVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLSTPALLLFADIIGRLIVPGELRVSVVSAFIGAP
VLIFLVRRKSGGGSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 8e-32 46
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 8e-32 46
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 8e-32 46
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 8e-32 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_004729401.1 ferric enterobactin transport protein FepD VFG0926 Protein 2e-100 89