Gene Information

Name : ybbA (SBG_0451)
Accession : YP_004729357.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 514345 - 515031 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGCCAGCGGAAAATAGTGTTGAAGTTCATCGTCTCAGGAAGTCCGTCGGTCAGGGTGAGCATGAGCTTTCCATCCTTAC
CGGAGTTGAACTGGTTGTCAAACGTGGTGAAACCATTGCGCTGATTGGCGAATCAGGATCGGGCAAATCCACACTGCTGG
CAATTCTCGCCGGACTGGACGACGGCAGCAGCGGAGAGGTCAATCTGGTAGGGAAACCGCTTCATCAGATGGACGAAGAG
GCGCGGGCACAGCTTCGCGCTCAGCATGTCGGCTTTGTTTTTCAATCCTTTATGCTAATTCCTACGCTTAATGCATTGGA
AAACGTCGAACTGCCGGCCTTGCTGCGTGGAGAGAATAGCGGCCAAAGTAAAGCGGGGGCCAAAGCGCTGCTCGAACAAC
TGGGGCTGGGAAAACGGCTCGATCATCTTCCGGCGCAGCTTTCCGGCGGCGAACAGCAGCGTGTGGCGCTGGCGCGCGCG
TTTAATGGGCGTCCTGATATTTTGTTTGCCGATGAGCCGACGGGTAACCTTGATCGGCAGACCGGGGATAAAATCGCCGA
TTTGTTGTTCTCGCTTAACCGTGAGCATGGCACTACGCTGATTCTGGTGACGCACGATCCCCAACTGGCAGCACGTTGTG
ACAGGCGGCTGCGGCTGGCCGACGGTCTGTTACAGGAGGAAGCATGA

Protein sequence : 
MPAENSVEVHRLRKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVNLVGKPLHQMDEE
ARAQLRAQHVGFVFQSFMLIPTLNALENVELPALLRGENSGQSKAGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARA
FNGRPDILFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDPQLAARCDRRLRLADGLLQEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-32 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-32 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-32 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybbA YP_004729357.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-32 48
ybbA YP_004729357.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-38 47
ybbA YP_004729357.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-34 42
ybbA YP_004729357.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 1e-31 41