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Name : treC (SBG_3876) Accession : YP_004732660.1 Strain : Salmonella bongori NCTC 12419 Genome accession: NC_015761 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.93 Position : 4319618 - 4321270 bp Length : 1653 bp Strand : - Note : - DNA sequence : ATGAATATTCCCCACTGGTGGCAAAACGGCGTTATTTATCAGATTTACCCAAAAAGTTTTCAGGACACGACGGGTAGCGG CACTGGCGATTTACGTGGCGTCACACAGCGCCTTGACTATCTACAGCGACTCGGCGTAGATGCCATCTGGCTCACGCCGT TTTATATCTCGCCGCAAGTGGATAACGGTTATGACGTCGCAAACTATACGGCTATCGACCCAACCTATGGCACGCTGGAT GATTTTGACGAACTGGTCACACAGGCGAAAGCGCGTGGTATTCGCATTATTCTGGATATGGTGTTTAACCATACTTCCAC CCAGCACGCCTGGTTTCGCGACGCGCTGAATAAAGAGAGCCCATACCGCCAGTTTTACATCTGGCGCGATGGTACCCCGA ATGTCTGCCCAAATAACTGGCAATCCAAATTTGGCGGTAGCGCCTGGCGCTGGCATAGCCAGAGCGAACAGTACTATTTA CACCTTTTCGCGCCTGAGCAGGCCGATCTGAACTGGGAAAATCCCGCGGTGCGCGCAGAATTGAAAAAGGTCTGCGAATT CTGGGCGGATCGTGGCGTAGATGGCCTGCGTCTGGACGTAGTGAATCTGATCTCCAAACAACAGGATTTTCCTGACGATC CGCTGGGCGACGGACGCCGCTTTTATACTGACGGACCGCGCGCGCATGAATTTTTGCGCGAAATGAACCGTGACGTTTTC ACACCGCGTAATCTGATGACGGTAGGTGAAATGTCCTCTACCACGCTGGAAAACTGCCAGCAATATGCTGCGCTTAACGG CGACGAGCTATCGATGACCTTCAACTTTCATCACCTGAAAGTAGATTACCCCGGCGGTGAAAAGTGGACGCTGGCAAAAC CTGATTATGTGGCGCTGAAAGCGCTGTTCCGCCACTGGCAACAGGGGATGCATAACGTCGCCTGGAATGCGCTGTTCTGG TGTAACCACGATCAGCCACGCATCGTCTCGCGTTTTGGCGACGAGGGGCAATATCGGGTGCTGGCGGCCAAAATGCTGGC GATGGTGCTACATGGTATGCAGGGCACGCCTTATATCTATCAGGGTGAAGAGATCGGCATGACTAATCCGCATTTTCGCC GCATTACCGATTACCGCGACGTGGAAAGCCATAATATGTTTGCCGCACTACGCACCGCCGGACGCGAAGCCGACGAGCTA TTGGCCATTCTGGCCAGTAAATCTCGCGATAACAGCCGCACGCCGATGCAGTGGGACAGCAGTGACAACGCGGGGTTCAC CCACGGCGTGCCGTGGATAAACCTGTGCGACAACTATGCGGAGGTAAACGTTGAAGCGGCATTAAGCGATAAAAACTCCG TGTTTTACACCTATCAAAAGCTGATCGCGCTGCGTAAAACGTACCCCGTACTGATCTGGGGCGATTATCATGATTTTCTC CCGGAGAGCCCGTATCTGTGGTGCTATCGCCGCCAATGGCAGGGTCAAACCCTGCTGGTGGTGGCAAACCTGAGCAAAAC ATGTCAGGAGTGGCATCCGCCGCATACCAAAGGACAGTGGCAGGCGCTAATGCACAATTATGGCGAGGCGGCCAGCCAGC CAGCCACAATGACACTTCGTCCATTTGAAACCATCTGGTGGTTACAGCGCTAG Protein sequence : MNIPHWWQNGVIYQIYPKSFQDTTGSGTGDLRGVTQRLDYLQRLGVDAIWLTPFYISPQVDNGYDVANYTAIDPTYGTLD DFDELVTQAKARGIRIILDMVFNHTSTQHAWFRDALNKESPYRQFYIWRDGTPNVCPNNWQSKFGGSAWRWHSQSEQYYL HLFAPEQADLNWENPAVRAELKKVCEFWADRGVDGLRLDVVNLISKQQDFPDDPLGDGRRFYTDGPRAHEFLREMNRDVF TPRNLMTVGEMSSTTLENCQQYAALNGDELSMTFNFHHLKVDYPGGEKWTLAKPDYVALKALFRHWQQGMHNVAWNALFW CNHDQPRIVSRFGDEGQYRVLAAKMLAMVLHGMQGTPYIYQGEEIGMTNPHFRRITDYRDVESHNMFAALRTAGREADEL LAILASKSRDNSRTPMQWDSSDNAGFTHGVPWINLCDNYAEVNVEAALSDKNSVFYTYQKLIALRKTYPVLIWGDYHDFL PESPYLWCYRRQWQGQTLLVVANLSKTCQEWHPPHTKGQWQALMHNYGEAASQPATMTLRPFETIWWLQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 2e-124 | 45 |
