Gene Information

Name : basR (SBG_3733)
Accession : YP_004732524.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4156476 - 4157144 bp
Length : 669 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGATACTGATTGTTGAAGACGACACGCTATTATTACAGGGGTTAATACTCGCCGCGCAAACTGAAGGTTACGCCTG
CGATGGCGTTTCGACAGCACGTGCTGCCGAACATAGTCTGGAGTCAGGTCATTACAGTCTGATGGTGCTGGATTTAGGGT
TGCCCGATGAGGACGGCCTGCACTTTCTGGCACGGGTGCGACAGAAAAAATATACTCTGCCGGTACTCATTCTGACCGCC
CGCGATACGCTCAATGACCGCATCACCGGGCTGGACGTCGGCGCGGACGATTACCTGGTTAAACCCTTCGCCCTGGAGGA
GTTGCACGCCCGTATCCGCGCGCTGCTGCGCCGCCATAATAATCAGGGCGAAAGTGAACTGACAGTCGGCAAACTGACGC
TTAATATGGGACGGCACCAGGTCTGGATGGACGGCCAGGAGCTAACCCTGACGCCTAAAGAGTACGCCCTGCTGTCACGG
TTGATGCTCAAAGCGGGCAGCCCGGTACACCGGGAGATTCTGTATAACGATATCTACAACTGGGATAACGAACCTTCGAC
CAACACTCTGGAAGTGCATATTCATAACTTGCGCGACAAAGTCGGTAAAGCGCGCATTCGCACGGTTCGCGGGTTTGGCT
ACATGCTGGTTGCCACTGAGGAAAGCTAA

Protein sequence : 
MKILIVEDDTLLLQGLILAAQTEGYACDGVSTARAAEHSLESGHYSLMVLDLGLPDEDGLHFLARVRQKKYTLPVLILTA
RDTLNDRITGLDVGADDYLVKPFALEELHARIRALLRRHNNQGESELTVGKLTLNMGRHQVWMDGQELTLTPKEYALLSR
LMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKVGKARIRTVRGFGYMLVATEES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-31 43
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
basR YP_004732524.1 two-component response regulator BAC0487 Protein 9e-56 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
basR YP_004732524.1 two-component response regulator VFG0473 Protein 7e-90 97
basR YP_004732524.1 two-component response regulator VFG0596 Protein 9e-23 41