Gene Information

Name : yjcC (SBG_3708)
Accession : YP_004732503.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4943
EC number : -
Position : 4130049 - 4131650 bp
Length : 1602 bp
Strand : +
Note : -

DNA sequence :
ATGAGTCATAGCACACGACGTAAGGTGTTGAGCTTTCTCGGAACGTTCATGGTGGTGTTACTTCCTGTATTACTGGCGAT
ATGGTTTGCGCATATTCGGGCAGTCTCTGAAACCAGAAATCAGCTACACGCATTTGCGCAGTTAGTATTAGATAAAACGG
AGGGGGTTATCCTGCAGGCGGACTTGGCTCTGGATGCTGCCGAACAATATTCAGGGCAGGCTTGTACGCCTGCACATCAA
CAACGAATGCTGAACATTATCCGTGGTCGTTTGTACATTAACGAGATGATTTATGCCGAGGGCGAGCGTTTTTTATGCTC
TACGGTGATGAAGCCAGATAGCCCTTATTTTATTTCCCGTGCTGACTATAAACGTAAACCTGACCTCGCTATTTATTACT
ATCGTGATACACCTTTTTTCAGTGGTTATAAAATGACGTATATGCAGCGGGGAAGCTATGTAGCGGTGATCAATCCCTTA
TCTTATAGCGAGGTCATGTCAGACGATCCGGCGCTAGCCTGGGGAATATATGATACGTTGACCAAAACCTTTTTCTCCCT
GAGTGAACTGGCGCAGGCTGCCGAGCTATTACCTTTGGTGCGACGGGGTGAGCCTATTTTCCAACAGGGAGAGCGTTTTT
ATACGCTGGTTAAATCAGCAAAACGACCGATTGCCGCCATTGTTTCAACCTCAAATGCACGTTTTTACCAGAACCGCTTC
CATCAGCTTACGTTAACTCTTCCGTTAGGGATCATCTGTAGCATTCTCGTCTTATTCGTGTGGTCACGATCCCGGCAGGC
ATATCACTCCCCGCGCCGGCTGCTACAACGCGCCATTGCCAGACATCAGCTTTGCCTTCATTATCAACCGATCATTGATA
TCCGTAGCGGGACGTGTGTCGGCGCTGAAGCGCTGTTGCGTTGGCCGGGTTATAGCGGTCCGGTGATGAGTCCTGGCGAA
TTTATTCCGCTGGCGGAAAAAGAGGGGATGATTGAGCAAATTACCGATTATGTCGTCGAAGGGGTATTTAATGATTTAGG
TTATTTTCTGGCCGCACATCCTCACCTTTATATCTCTATTAATCTCTCTGCCGCCGATTTTCTCTCTTCGCGGTTAATCG
CGATGATTCATGAAAAAACGCGTCAGTATTCAGTGCTGGCGCAACAGATAAAGGTTGAAGTGACCGAGCGCGGATTTATT
GATGTACCTAAAATGACGCCAATCATTCAGGCGTTTCGCCAGGCGGGTTATGAAGTGGCTATTGATGACTTTGGCACGGG
GTATTCAAACTTACATAACCTGTATTCATTAAATGTTGATCTTTTAAAAATTGATAAATCATTTGTTGATACGTTAACCA
CCAATAGTACCAGCCATTTGATTGTGGAGCATATTATTGAAATGGCACAAAGTTTGCGGCTAAAAATCATTGCCGAAGGG
GTTGAGACGGGGGAGCAGGTTAGCTGGCTGCTAAAGCGCGGCGTCCAGTATTGTCAGGGATGGCATTTTGCGAAAGCGCT
GCCGCCGCATGAGTTCATCGCCTGGCTACAACACTCGCCCACGTCTCTGACGATACGCGGGCAAATGTCCTACAGACGGT
GA

Protein sequence :
MSHSTRRKVLSFLGTFMVVLLPVLLAIWFAHIRAVSETRNQLHAFAQLVLDKTEGVILQADLALDAAEQYSGQACTPAHQ
QRMLNIIRGRLYINEMIYAEGERFLCSTVMKPDSPYFISRADYKRKPDLAIYYYRDTPFFSGYKMTYMQRGSYVAVINPL
SYSEVMSDDPALAWGIYDTLTKTFFSLSELAQAAELLPLVRRGEPIFQQGERFYTLVKSAKRPIAAIVSTSNARFYQNRF
HQLTLTLPLGIICSILVLFVWSRSRQAYHSPRRLLQRAIARHQLCLHYQPIIDIRSGTCVGAEALLRWPGYSGPVMSPGE
FIPLAEKEGMIEQITDYVVEGVFNDLGYFLAAHPHLYISINLSAADFLSSRLIAMIHEKTRQYSVLAQQIKVEVTERGFI
DVPKMTPIIQAFRQAGYEVAIDDFGTGYSNLHNLYSLNVDLLKIDKSFVDTLTTNSTSHLIVEHIIEMAQSLRLKIIAEG
VETGEQVSWLLKRGVQYCQGWHFAKALPPHEFIAWLQHSPTSLTIRGQMSYRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yjcC YP_219130.1 diguanylate cyclase/phosphodiesterase Not tested SPI-4 Protein 0.0 91

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yjcC YP_004732503.1 hypothetical protein VFG0584 Protein 0.0 90