Gene Information

Name : ssb (SBG_3700)
Accession : YP_004732495.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : single-strand DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 4104083 - 4104613 bp
Length : 531 bp
Strand : +
Note : -

DNA sequence : 
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTTGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAGTGG
CGGCGCTGTCGCTAACTTAACGCTGGCTACTTCTGAATCCTGGCGCGATAAGCAGACCGGCGAAATGAAAGAGCAAACGG
AATGGCACCGTGTCGTCATGTTCGGCAAACTGGCGGAAGTCGCCGGCGAATATCTGCGTAAAGGTTCACAGGTGTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAAAATGGCCAGGAGCGATATACGACTGAAATTAACGTTCCGCAGAT
TGGCGGCGTGATGCAGATGTTAGGTGGCCGTCAGGGCGGCGGCGCGCCAGCAGGCGGCCAACAGCAGGGTGGTTGGGGTC
AGCCACAACAACCTCAGCAACCGCAGGGCGGCAACCAGTTCAGTGGTGGCGCCCAGTCGCGTCCACAGCAATCCACGCCG
GCTCCGTCTAACGAACCGCCAATGGATTTTGACGACGATATTCCGTTCTGA

Protein sequence : 
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANLTLATSESWRDKQTGEMKEQTEWHRVVMFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQNGQERYTTEINVPQIGGVMQMLGGRQGGGAPAGGQQQGGWGQPQQPQQPQGGNQFSGGAQSRPQQSTP
APSNEPPMDFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 5e-42 79
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 5e-41 62
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 5e-41 62
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 4e-41 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssb YP_004732495.1 single-strand DNA-binding protein VFG0576 Protein 4e-53 99