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Name : dnaB (SBG_3691) Accession : YP_004732488.1 Strain : Salmonella bongori NCTC 12419 Genome accession: NC_015761 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 4094389 - 4095804 bp Length : 1416 bp Strand : + Note : - DNA sequence : ATGGCAGGAAATAAACCCTTCAACAAACAACAGACTGATGCCCGCGACCGCGATCCGCAGGTTGCCGGGATAAAAGTGCC GCCGCACTCGATTGAAGCGGAACAGTCGGTGTTGGGCGGTTTAATGCTGGATAACGAGCGCTGGGACGATGTGGCCGAGC GCGTAGTAGCGGAAGATTTTTATACCCGCCCGCATCGCCATATCTTTACGGAGATGGGGCGCTTACAGGAAAGCGGCAGT CCTATTGATCTGATTACGCTCGCGGAATCACTGGAGCGGCAGGGGCAACTGGATAGCGTCGGCGGTTTCGCTTATCTGGC TGAGCTGTCGAAAAACACGCCAAGCGCGGCCAATATTAGCGCTTATGCGGATATCGTGCGCGAACGCGCCGTGGTCCGCG ATATGATCTCTGTGGCGCATGAAATTGCGGACGCTGGTTACGATCCACAGGGGCGTAATAGCGACGAACTGCTGGATTTG GCGGAGTCACGTGTTTTCCAGATTGCAGAAAACCGCGCAAATAAAGACGAAGGTCCGAAAAGCATCGACCAGATCCTTGA TGCTACCGTGGCGCGTATTGAGCAGTTGTTCCAGCAACCGCACGATGGCGTTACTGGCGTGGATACAGGCTATCAGGATC TCAATAAAAAGACGGCGGGGCTACAGCGTTCGGATTTGATCATCGTTGCAGCGCGTCCGTCGATGGGTAAAACCACATTT GCGATGAACCTCTGCGAAAACGCAGCGATGTTACAGGATAAACCAGTACTGATTTTTAGTCTGGAGATGCCTGGCGAACA GATTATGATGCGTATGCTGGCGTCGCTGTCCCGCGTTGATCAGACGCGTATCCGTACCGGTCAGCTGGATGATGAAGACT GGGCGCGAATCTCCGGAACGATGGGCATCTTGCTGGAGAAGCGCAATATGTACATTGACGACTCCTCGGGGCTTACGCCG ACGGAAGTTCGATCGCGCGCGCGGCGTATCTTTCGCGAGCATGGCGGGTTAAGCCTGATTATGATCGACTACCTGCAACT GATGCGCGTGCCGTCGCTTTCTGATAACCGTACCCTGGAGATCGCCGAAATTTCCCGCTCGCTGAAAGCGCTGGCGAAAG AGCTTCAGGTGCCTGTTGTGGCGCTATCGCAGCTTAACCGCTCCCTGGAGCAACGGGCGGATAAACGTCCGGTTAACTCC GACCTGCGTGAATCCGGCTCTATTGAACAGGATGCTGACTTAATCATGTTTATCTACCGTGATGAGGTGTATCACGAGAA CAGCGATTTAAAAGGCATTGCTGAAATTATTATTGGTAAGCAACGTAACGGTCCTATCGGTACGGTTCGTCTGACGTTTA ACGGTCAGTGGTCGCGCTTCGATAATTATGCGGGACCGCAGTACGATGATGAGTAA Protein sequence : MAGNKPFNKQQTDARDRDPQVAGIKVPPHSIEAEQSVLGGLMLDNERWDDVAERVVAEDFYTRPHRHIFTEMGRLQESGS PIDLITLAESLERQGQLDSVGGFAYLAELSKNTPSAANISAYADIVRERAVVRDMISVAHEIADAGYDPQGRNSDELLDL AESRVFQIAENRANKDEGPKSIDQILDATVARIEQLFQQPHDGVTGVDTGYQDLNKKTAGLQRSDLIIVAARPSMGKTTF AMNLCENAAMLQDKPVLIFSLEMPGEQIMMRMLASLSRVDQTRIRTGQLDDEDWARISGTMGILLEKRNMYIDDSSGLTP TEVRSRARRIFREHGGLSLIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNS DLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-103 | 55 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 4e-105 | 54 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 1e-105 | 54 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 1e-104 | 54 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 2e-100 | 50 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-91 | 50 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-91 | 50 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 9e-86 | 49 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 3e-80 | 45 |
