Gene Information

Name : aldB (SBG_3262)
Accession : YP_004732069.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase B
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.22
Position : 3578180 - 3579718 bp
Length : 1539 bp
Strand : -
Note : -

DNA sequence :
ATGACGAACAATCCCCCTTCAACACGTATTCATCCAGGTGAATATGGGTACCCACTGAAGTTAAAAGCCCGCTATGACAA
CTTTATCGGCGGTGACTGGGTTGCGCCCGCCGGGGGCGAATATTATCAAAACCTGACGCCAGTGACCGGCCAGCCGCTGT
GTGAAGTCGCCTCTTCCAGTAAAAAAGATATCGATTTGGCGCTCGACGCCGCGCATAAGGCGAAAGATAAATGGGCGCAT
ACGTCGGTGCAGGATCGCGCCGCTATCTTGTTTAAGATTGCTGATCGAATGGAGCAAAACCTCGAATTGTTGGCAACTGC
GGAAACCTGGGATAACGGTAAACCGATTCGTGAAACCAGCGCCGCCGACGTGCCGCTGGCGATCGATCATTTCCGCTATT
TTGCCTCCTGTATACGTGCCCAGGAGGGTGGGATCAGCGAGGTTGATAGTGAAACCGTGGCCTACCATTTTCATGAACCA
CTTGGTGTCGTAGGACAGATAATCCCATGGAACTTTCCGCTGTTAATGGCCAGTTGGAAAATGGCGCCGGCGCTGGCTGC
TGGCAACTGCGTGGTGCTTAAGCCAGCACGCCTGACGCCGCTTTCCGTTCTGCTGTTAATGGAAGTCATTGGCGATTTGC
TACCGCCGGGCGTCGTTAACGTGGTGAACGGCGCGGGCGGTGAGATTGGCGAATATCTGGCGACCTCGAAGCGTATCGCA
AAAGTGGCGTTTACCGGTTCGACAGAAGTTGGCCAACAGATCATGCAGTACGCCACCCAGAATATTATTCCGGTCACGCT
GGAGTTAGGAGGCAAATCGCCAAATATCTTCTTTGCTGACGTTATGGATGAAGAAGATGCGTTCTTTGATAAAGCGCTGG
AGGGATTTGCCCTGTTTGCCTTTAACCAGGGTGAAGTATGTACCTGCCCAAGCCGCGCGCTGGTACAGGAATCCATCTAT
GAACGCTTTATGGAACGGGCTATTCGCCGGGTAGAGAGCATCCGCAGTGGGAACCCGCTAGATAGTGGGACGCAAATGGG
CGCTCAGGTCTCCCACGGGCAGCTTGAAACTATCCTTAATTATATCGATATCGGTAAAAAAGAGGGGGCTGATATTCTGA
CCGGCGGACGACGCAAGGAACTGGAGGGTGAGCTTAAAGAGGGCTATTACCTCGAACCCACCATCCTGTCTGGTAAGAAC
AATATGCGCGTTTTCCAGGAGGAGATTTTTGGCCCGGTACTGGCGGTAACCACTTTTAAAACCATGGAAGAGGCGCTGGA
AATCGCCAACGATACGCAGTATGGCCTCGGTGCGGGCGTCTGGAGTCGTAACGGCAGCCTGGCCTACAAAATGGGCCGGG
GAATTCAGGCTGGCCGTGTGTGGACCAACTGTTATCACGCCTATCCGGCACATGCGGCGTTCGGTGGATATAAACAGTCC
GGTATCGGTCGTGAAACCCATAAAATGATGCTGGAGCATTATCAGCAGACCAAATGTCTGTTAGTCAGCTATTCCGATAA
GCCGCTGGGGCTGTTTTAA

Protein sequence :
MTNNPPSTRIHPGEYGYPLKLKARYDNFIGGDWVAPAGGEYYQNLTPVTGQPLCEVASSSKKDIDLALDAAHKAKDKWAH
TSVQDRAAILFKIADRMEQNLELLATAETWDNGKPIRETSAADVPLAIDHFRYFASCIRAQEGGISEVDSETVAYHFHEP
LGVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEVIGDLLPPGVVNVVNGAGGEIGEYLATSKRIA
KVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNIFFADVMDEEDAFFDKALEGFALFAFNQGEVCTCPSRALVQESIY
ERFMERAIRRVESIRSGNPLDSGTQMGAQVSHGQLETILNYIDIGKKEGADILTGGRRKELEGELKEGYYLEPTILSGKN
NMRVFQEEIFGPVLAVTTFKTMEEALEIANDTQYGLGAGVWSRNGSLAYKMGRGIQAGRVWTNCYHAYPAHAAFGGYKQS
GIGRETHKMMLEHYQQTKCLLVSYSDKPLGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-132 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-138 63
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-138 63
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-138 63
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-137 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldB YP_004732069.1 aldehyde dehydrogenase B VFG0082 Protein 7e-133 64