Gene Information

Name : lpfB (SBG_3232)
Accession : YP_004732044.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : fimbrial chaperone protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 3551492 - 3552190 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence : 
ATGAACCGCTCACGTTTGATATCTTGCGCAGCACTGGTGGTGGCGCTGATTGCTCAAAACAGTTTTGCCGGTGGCGTGGC
ATTAAGCAGCACGCGTGTTATTTATGACGGTAGTAGAAAGGAAGCTTCTCTTACGGTAAATAATAAAAGTACCACGGATG
AATTTCTCATTCAGTCATGGATTGATGATGCTAATGGTAATAAAAAAACGCCCTTTATCATCACTCCGCCGTTATTTAAA
TTAAGTCCGACTAAAAATAACGTTTTACGTATTGTTAATACGACGAACACGTTACCGCAGGATCGCGAGTCCGTTTATTG
GGTTAACGTAAAAGCTATTCCTGCTAAAAGTGAAGACGCGGAAGCTAAAAACGTACTGCAGATCGCCGTACGTACCCGCT
TAAAACTGTTCTATCGCCCGGCGGGCCTGAAAGGCAATAGCATGGACGGCTGGAACAAACTGCAGTTCACCAGCGCCGGG
GCTAACCAGATCAAAGTGGAAAACCCCTCTGCCTTTAACCTGACGTTTAATAAATTTTATGCCAACGGTCGTGATATTGA
AAAAACGGGAATGGTTCCGGCAAAAGGCTCATTGAATATTGAACTGCCAGCCGGCACCGGCAAGGTAAGCGAAGTTAAAT
ACAACATTATTAATGACTTTGGCACGGCTGGCGACATGTTGACACAGCGCGTTAATTAA

Protein sequence : 
MNRSRLISCAALVVALIAQNSFAGGVALSSTRVIYDGSRKEASLTVNNKSTTDEFLIQSWIDDANGNKKTPFIITPPLFK
LSPTKNNVLRIVNTTNTLPQDRESVYWVNVKAIPAKSEDAEAKNVLQIAVRTRLKLFYRPAGLKGNSMDGWNKLQFTSAG
ANQIKVENPSAFNLTFNKFYANGRDIEKTGMVPAKGSLNIELPAGTGKVSEVKYNIINDFGTAGDMLTQRVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-40 42
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 1e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lpfB YP_004732044.1 fimbrial chaperone protein VFG0455 Protein 1e-103 99
lpfB YP_004732044.1 fimbrial chaperone protein VFG0445 Protein 2e-40 42
lpfB YP_004732044.1 fimbrial chaperone protein VFG1644 Protein 8e-39 41
lpfB YP_004732044.1 fimbrial chaperone protein VFG0911 Protein 8e-39 41