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Name : sbbB (SBG_0299) Accession : YP_004729208.1 Strain : Salmonella bongori NCTC 12419 Genome accession: NC_015761 Putative virulence/resistance : Virulence Product : fimbrial chaperone protein Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 341555 - 342289 bp Length : 735 bp Strand : - Note : - DNA sequence : GTGTTATCTACATGTTATTACAAAATGTTAGTGTCATTCGCTGTCGGTTTCACACTACTGAACAGCAATATTGTAAATGC AGCTATAAATGTTGATCGTACTCGGATAGTAATGGGAGGAGAAGATAAATCACTCGCTGTCACATTAACTAATCAGAGCA AGTCTCAGCCTTATCTCGCACAGTCGTGGATTGATGACGCCAGTGAAAAGCGCTCCGAATCCTACTTACTGGTGCTACCG CCATTACAGCGTATTGATGCCGGTAAAAAGGCCCAGGTGAGGATTGTGGCATTACCCGGAACCGCGTCCTTAGCCAAAGA CCGTGAGACACTTTTCTACTTTAATGTCAGGGAAATTCCGCCGAAAAGCGACAAAGAAAATATACTGCAAATCGCCTTAC AGAGTCGATTAAAATTGTTTTACCGACCTGATGGTATAAAGAAAAATGCCAGTGAACGTTCGGAAGAAAAGGTAACAGTA ACACGTCATAATGATAAATTAGTCATAAACAACCCTACACCATATTATATTACGCTGGGTTATCTGGGAGATGATAATAA AGGTAGCTTTCCTGGATTTGACAGCCTGATGATCGCACCTTTTTCGTCTCAGGATTTTCATGCAAAATGGCACGGTGATA CATTACAAGTGGGCTACATTGATGATTTTGGTGGACTTCATATAAATCAGTATCATTGTGCTGGATCATTATGCAGTCTG AAAGGAAAAAAGTAG Protein sequence : MLSTCYYKMLVSFAVGFTLLNSNIVNAAINVDRTRIVMGGEDKSLAVTLTNQSKSQPYLAQSWIDDASEKRSESYLLVLP PLQRIDAGKKAQVRIVALPGTASLAKDRETLFYFNVREIPPKSDKENILQIALQSRLKLFYRPDGIKKNASERSEEKVTV TRHNDKLVINNPTPYYITLGYLGDDNKGSFPGFDSLMIAPFSSQDFHAKWHGDTLQVGYIDDFGGLHINQYHCAGSLCSL KGKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 1e-37 | 41 |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 6e-43 | 41 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 4e-43 | 41 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 3e-43 | 41 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 5e-43 | 41 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 4e-43 | 41 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 4e-43 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sbbB | YP_004729208.1 | fimbrial chaperone protein | VFG0885 | Protein | 6e-38 | 41 |
| sbbB | YP_004729208.1 | fimbrial chaperone protein | VFG1547 | Protein | 3e-43 | 41 |
| sbbB | YP_004729208.1 | fimbrial chaperone protein | VFG0896 | Protein | 2e-43 | 41 |
