Gene Information

Name : sbeI (SBG_0295)
Accession : YP_004729204.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : pilin-related type II secretion protein
Function : -
COG functional category : N : Cell motility
COG ID : COG1459
EC number : -
Position : 337887 - 338915 bp
Length : 1029 bp
Strand : +
Note : alternative possible translational start site

DNA sequence :
TTGAGAAAGCTTACTAAAAAGCAGAGATTATACCTGTATCAGTTCTGTGCGGATATGATCGACTCGGGTATTCCATTATA
TGATTCTATTCAGAAATTACGTGATGAAGGAAAAGGACTTCTTGGAAAAGGGTTTATTGGAAAGTTAGATCTTATCAGTA
ACCGGATGGCTGAAAGCGAATCAGTCAATGCTGTGTTTGCTGGTCTTGTACCTAAAGACGAACTCAGCGTAATCTTTTCT
TCTGAGAAAAGTGGTTCGTTGTCAAGCGGATTTCGGGGCATTGCGGAAATGATTAATTATCGCAAAGAGCTGACCTCCAG
TATAGCTAAAGCAGTATCTTTCCCATTGATTATGCTGGTTCTCGCGCTGGTTGTGATTTCAGGCTATGCAGTTAAAGTAT
TTCCTGCATTTGAACGGGTGGTACCTACGCAGCGATGGCCGACTGTTACGCAAGTATTATATAGTTTTGGTTCATCGCTA
TATAACGGGTTATGGATTTATTTTCTGATATTTTTTATAGCTGCGTATATAATAATCGTTTTACTCTTAAATAACCTTAC
AGGTAATTTACGCAATAATGTTCTGGATCGTATCATACCTTTCTCAATTTATAAAAAAATGGTCTGCTCTGTGTTTATTA
GTAATCTTTCATCAATGCTCAAAAACAAAGTGCCGATTAACGATAGTTTAACTGTACTGAGTCAGAATGCTAACCGATGG
CTTTATGCGCATATCAACACAATGTTAGATAATATGGCTCGTGGGGATACCTATAAAGATGCGCTTAATACAGGATTACT
CGGAAAAGAAGAAATTCTGAATGTCAGTATTTATTCTGGTCTACCATCATTTTCAGATGTTCTGGCTGCAGTGGCTCTCA
AGGCTCGAAAAGATTTGGCTCAGGCAATATCGCGGTTATCAGGGCTACTGAAATCATTGTCAACACTGGTTCTGGGCGGA
TGTGTAGTATGGGTGTTCGTCGCATTATTTGCGTTGTCTGATACATTATCAAAAATGACCAGTTTCTGA

Protein sequence :
MRKLTKKQRLYLYQFCADMIDSGIPLYDSIQKLRDEGKGLLGKGFIGKLDLISNRMAESESVNAVFAGLVPKDELSVIFS
SEKSGSLSSGFRGIAEMINYRKELTSSIAKAVSFPLIMLVLALVVISGYAVKVFPAFERVVPTQRWPTVTQVLYSFGSSL
YNGLWIYFLIFFIAAYIIIVLLLNNLTGNLRNNVLDRIIPFSIYKKMVCSVFISNLSSMLKNKVPINDSLTVLSQNANRW
LYAHINTMLDNMARGDTYKDALNTGLLGKEEILNVSIYSGLPSFSDVLAAVALKARKDLAQAISRLSGLLKSLSTLVLGG
CVVWVFVALFALSDTLSKMTSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcpE AAK20793.1 toxin-coregulated pilus biosynthesis protein E Virulence VPI Protein 1e-51 41
tcpE CAA45463.1 - Virulence VPI Protein 1e-51 41
VC0836 NP_230484.1 toxin co-regulated pilus biosynthesis protein E Virulence VPI-1 Protein 2e-51 41
tcpE YP_001216317.1 toxin co-regulated pilus biosynthesis protein E Virulence VPI-1 Protein 2e-51 41
tcpE AAK20763.1 toxin-coregulated pilus biosynthesis protein E Virulence VPI Protein 1e-51 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sbeI YP_004729204.1 pilin-related type II secretion protein VFG0099 Protein 7e-52 41