Gene Information

Name : sbeH (SBG_0294)
Accession : YP_004729203.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : pilin-related type II secretion protein
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 336374 - 337903 bp
Length : 1530 bp
Strand : +
Note : -

DNA sequence :
ATGATTTATTATGACTTTCTTCACCTTGATAATGGAGACTTATTATCAGACTGGCAATTCAGCCTTAAAGAGGAGGAACT
GCTGGTCGGTGAGCATAATGGCATATTCAGTCTGATGGTTCACCAGTTGAATATGAACGATCTCGCTGAAATTCAGCAAA
GTATCCTATATCTGAATCTCTGCTGTGATATTGATATTAGTCGCATAGTATTAATAAAGGACAACCTTTATTATAGTATC
TTTGAAAGACTCGTTAAAAAGAATCTTTCTGTCAGAGAAGGTGTCGTCAGTACGGTACAAGCAGATCTCGAGAGATTGTT
ACAGATGGCTGTGGATGCCGGGGCCAGTGATCTTCATATTACCCGAAACGATCAGCTTGCCAGTGTAGAGTTCAGGGTAA
ATGGCGTCCTGGTCCCGCATTCAAAGATTCTGTCTTCAAAATGTGATGAACTTTGTTTTGTGCTTTACAACGTACAGGCT
TCGACAAAAGAGACAACCTGGAACCGTTCTGTTCCCCAGAGTGCCAATATTTTATATTCTCTGGGAGGAAAAAGCTTTCG
TTTCCGGTATGCACATTTTCCGATCTTTGGTGAGACGACATCATGTTATCACTGTGTACTTCGTATTATTCCCGCTGGCG
TCAGTAACTCGACGATCCCTTCTCTGGAAAAGTTGGGGGTTTCTGGTGACGAGGTTGAAGATATTAAGAGAGTTCTGAGT
AACCCGTATGGTGTTTACGTGGTTGCAGGTACGACAGGATCAGGGAAATCAACTACGCTGAAAAACCTGATGGAGTGGCT
ACAGAAAAACCGTTATTCAGGTAAAGGTTGCTTTCTGACAATTGAAGATCCGGTGGAATATCAGATTTGGGGGGCTAAAC
AAAGTTCTGTACTGGATGTGGATGGTGGGGGATTCCATTCAGCAATTAAGTCTGCGCTCCGTCGCGATCCTGATGTATTG
ATGGTTGGGGAGATTAGGGATAATATTTCTGCTAATGCCCTGGCGGGGGCTGTGGAAAGCGGTCATTACTGTTTTACTAC
TGTTCATGCCGGGAATATTGTTACGCTATTACAGCGTCTCGTTGCGCTGGGTGTTTCATCAGATAAGTTATCCACCCCTG
GATTTATTGCCGGATTGCAATGCCAAAAATTGTTACCGGTACTCTGCCATCATTGTAAAAAAGAAAATAATCATACTGTG
CTGGGAAGACATTTTCCTGTCTTTATACTGAATGAAGAAGGATGCGAACATTGTTTTTATACCGGTCTGAAGAGCAGGCA
ACTGGTAATCGAATATATGCGCCCCACGTACGATGAGCTGAAAGCAATTGCTGAAAGTCACTGGCTGGAAGCATATACGA
TCTGGAGGAAAAAACGTTTTACAACCAGCGGAATTGCTGAAGGGTTTGATCTGAAAGAAAAGGCTTTTCATCATGTTCTC
AAGGGAAATGTCTGTGCTTCCTGGTTCAGTATGGAGTTTGGTAAAGTTGAGGAAAAAGATCTGGAGGTACTAATTGAGAA
AGCTTACTAA

Protein sequence :
MIYYDFLHLDNGDLLSDWQFSLKEEELLVGEHNGIFSLMVHQLNMNDLAEIQQSILYLNLCCDIDISRIVLIKDNLYYSI
FERLVKKNLSVREGVVSTVQADLERLLQMAVDAGASDLHITRNDQLASVEFRVNGVLVPHSKILSSKCDELCFVLYNVQA
STKETTWNRSVPQSANILYSLGGKSFRFRYAHFPIFGETTSCYHCVLRIIPAGVSNSTIPSLEKLGVSGDEVEDIKRVLS
NPYGVYVVAGTTGSGKSTTLKNLMEWLQKNRYSGKGCFLTIEDPVEYQIWGAKQSSVLDVDGGGFHSAIKSALRRDPDVL
MVGEIRDNISANALAGAVESGHYCFTTVHAGNIVTLLQRLVALGVSSDKLSTPGFIAGLQCQKLLPVLCHHCKKENNHTV
LGRHFPVFILNEEGCEHCFYTGLKSRQLVIEYMRPTYDELKAIAESHWLEAYTIWRKKRFTTSGIAEGFDLKEKAFHHVL
KGNVCASWFSMEFGKVEEKDLEVLIEKAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcpT YP_001216316.1 toxin co-regulated pilus biosynthesis protein T Virulence VPI-1 Protein 5e-90 45
VC0835 NP_230483.1 toxin co-regulated pilus biosynthesis protein T Virulence VPI-1 Protein 5e-90 45
tcpT AAK20762.1 toxin-coregulated pilus biosynthesis protein T Virulence VPI Protein 4e-90 45
tcpT CAA45462.1 - Virulence VPI Protein 4e-90 45
tcpT AAK20792.1 toxin-coregulated pilus biosynthesis protein T Virulence VPI Protein 4e-90 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sbeH YP_004729203.1 pilin-related type II secretion protein VFG0098 Protein 2e-90 45