Gene Information

Name : sbeT (SBG_0286)
Accession : YP_004729195.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : pilin-like protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 329515 - 330003 bp
Length : 489 bp
Strand : +
Note : -

DNA sequence :
ATGATACAAAAAGTAATTTACATCGTTTTTTGTTTAATGATATGGAGCTGGGGAGTTCAGGCAGCAGAAACAGTAAACAA
TAAATATGACTGTTTTGAACTTGCTGGACGAGATGCAAATATTGACCCGATGTTACTTAGAGCAGTGGCATGGCAGGAGT
CGGGGCTCAATTACAGAATAACTGGCAGTAATGCTCTTGCTGGCTTTGGTAAAGGCTATGGCTATGGTTTGATGCAAATA
GATAGCCAGCACCTGCTATTTTTAAAAAAGTACGGTATAACAAAAGAAAATTTAATTAATGATATATGTCTGAACATTTA
TGTTGGTGCATATATTATGGCGGTAGCATTCAATAAATTCGGTGAAAACTGGAAAGCTGTAGGTGCATACAATGCCGGAT
TTAAAGAAAATAGTAAGCAACAAGAAAGGAGAACCCTGTATGCAAGGAAAGTGCATGCAACATACCAGTATTTGAAAAAA
CTTAAGTAG

Protein sequence :
MIQKVIYIVFCLMIWSWGVQAAETVNNKYDCFELAGRDANIDPMLLRAVAWQESGLNYRITGSNALAGFGKGYGYGLMQI
DSQHLLFLKKYGITKENLINDICLNIYVGAYIMAVAFNKFGENWKAVGAYNAGFKENSKQQERRTLYARKVHATYQYLKK
LK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
etgA AFO66404.1 putative lytic transglycosylase Not tested SESS LEE Protein 8e-24 45
etgA AFO66324.1 putative lytic transglycosylase Not tested SESS LEE Protein 8e-24 45
unnamed AAC31524.1 L0045 Not tested LEE Protein 6e-22 44
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 6e-22 44
unnamed AAK26704.1 unknown Not tested LEE Protein 5e-22 44
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 8e-22 44
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 8e-22 44
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 7e-22 44
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 7e-22 44
unnamed AAL57531.1 unknown Not tested LEE Protein 5e-22 44
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 5e-22 44
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 5e-22 44
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 1e-21 43
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 5e-21 43
unnamed AAL06358.1 unknown Not tested LEE Protein 3e-21 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sbeT YP_004729195.1 pilin-like protein VFG0823 Protein 2e-22 44
sbeT YP_004729195.1 pilin-like protein VFG0719 Protein 2e-21 43