Gene Information

Name : SBG_0280 (SBG_0280)
Accession : YP_004729189.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : prophage protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 323231 - 323572 bp
Length : 342 bp
Strand : +
Note : -

DNA sequence :
ATGCAAACCCAATACAACCACCCACACCGGGCGACCCCGTCACAGCCGTCGCCTGTCGAAATCTGGCAAAAACTGCTGAC
CCATTTACTGGCTAAACATTATGGGCTCGAACTCAGTGACACGCCGTTTAGCGTAGAGAAGGTGATTCAGGAACACATTG
ACGCCGGTATCACGCTGGCTAATGCCGTGAACTTTATTGTAGAGAAATACGAGCTGGTTCGTATCGATCGCAAGGGATTT
AGCTGGCAGGAACAATCACCCTATCTTCGGGCTGTAGACATTCTGCGGGCGCGACAGGCTACGGGTCTGTTGCGACGTCA
ACGCTATCTCGCGGCACACTGA

Protein sequence :
MQTQYNHPHRATPSQPSPVEIWQKLLTHLLAKHYGLELSDTPFSVEKVIQEHIDAGITLANAVNFIVEKYELVRIDRKGF
SWQEQSPYLRAVDILRARQATGLLRRQRYLAAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66207.1 hypothetical protein Not tested PAI III 536 Protein 2e-26 63
unnamed AAL57575.1 unknown Not tested LEE Protein 1e-26 60
z5091 CAD33789.1 Z5091 protein Not tested PAI I 536 Protein 2e-27 59
unnamed CAI43848.1 hypothetical protein Not tested LEE Protein 1e-27 59
aec76 AAW51759.1 Aec76 Not tested AGI-3 Protein 1e-27 59
yeeV YP_854325.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-27 59
unnamed AAL67342.1 intergenic-region protein Not tested PAI II CFT073 Protein 3e-27 59
yeeV CAE85204.1 YeeV protein Not tested PAI V 536 Protein 3e-27 59
ECO103_3592 YP_003223449.1 hypothetical protein Not tested LEE Protein 2e-27 59
unnamed AAL67389.1 L0007-like protein Not tested PAI II CFT073 Protein 5e-27 58
c5149 NP_756997.1 hypothetical protein Not tested PAI II CFT073 Protein 7e-27 58
unnamed CAD42101.1 hypothetical protein Not tested PAI II 536 Protein 2e-26 58
unnamed AAK00482.1 unknown Not tested SHI-1 Protein 9e-28 58
yeeV NP_838487.1 hypothetical protein Not tested SHI-1 Protein 1e-27 58
yeeV ADD91699.1 YeeV Not tested PAI-I AL862 Protein 7e-27 58
yeeV NP_708773.1 hypothetical protein Not tested SHI-1 Protein 1e-27 58
unnamed AAC31486.1 L0007 Not tested LEE Protein 2e-26 57
Z5091 NP_290242.1 hypothetical protein Not tested LEE Protein 3e-26 57
unnamed ACU09433.1 conserved hypothetical protein Not tested LEE Protein 2e-26 57
ECs4539 NP_312566.1 hypothetical protein Not tested LEE Protein 3e-26 57
unnamed AAL08478.1 unknown Not tested SRL Protein 3e-26 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBG_0280 YP_004729189.1 prophage protein VFG1682 Protein 7e-27 63
SBG_0280 YP_004729189.1 prophage protein VFG1530 Protein 7e-28 59
SBG_0280 YP_004729189.1 prophage protein VFG1620 Protein 7e-27 58
SBG_0280 YP_004729189.1 prophage protein VFG0663 Protein 4e-28 58
SBG_0280 YP_004729189.1 prophage protein VFG0786 Protein 8e-27 57
SBG_0280 YP_004729189.1 prophage protein VFG1069 Protein 1e-26 56