|
Name : xerD (SBG_2638) Accession : YP_004731452.1 Strain : Salmonella bongori NCTC 12419 Genome accession: NC_015761 Putative virulence/resistance : Unknown Product : site-specific integrase/recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 2902112 - 2903008 bp Length : 897 bp Strand : - Note : - DNA sequence : GTGAAACAGGATTTAGCGCGTATTGAACAGTTTCTGGATGCGCTGTGGCTGGAACGAAATCTGGCGGAAAATACATTAAG CGCGTATCGTCGCGATTTATCGATGGTCGTCGAATGGTTGCATCATCGCGGAAAATCGCTTGCGACGGCACAGGCTGATG ATTTACAAACGCTGTTGGCTGAGCGGGTGGAGGGTGGATACAAAGCGACAAGCTCCGCGCGTCTGTTAAGCGCTATGCGG CGTTTTTTCCAATATCTGTACCGTGAAAAGTATCGTGAGGACGACCCGAGCGCGCAGTTAGCTTCGCCCAAACTTCCACA GCGTTTGCCGAAAGATCTTAGCGAAACGCAGGTTGAACGGCTCTTGCAGGCGCCGCTTATTGATCAGCCTTTAGAGTTGC GCGATAAAGCTATGCTGGAAGTGCTGTACGCGACCGGTTTGCGCGTGTCGGAGCTGGTGGGGTTAACGATGAGTGATATC AGTCTGCGGCAGGGCGTTGTGCGGGTTATTGGTAAAGGCAATAAAGAGCGCCTGGTGCCATTAGGCGAAGAGGCCGTGTA CTGGCTGGAGACGTATCTGGAGCATGGGCGTCCCTGGCTACTCAATGGCGTCTCAATAGACGTATTGTTCCCTAGCCAGC GTGCGCAGCAGATGACGCGACAGACTTTTTGGCACCGTATTAAACATTATGCGACGCTGGCTGAAATTGATAGTGAAAAA CTGTCGCCGCACGTTTTACGCCACGCTTTCGCCACGCATTTGCTGAATCACGGCGCTGATTTACGCGTCGTACAAATGCT GCTCGGACATAGCGATCTTTCGACGACACAAATTTATACGCATGTCGCAACGGAGCGTTTGCGTCAACTTCATCAACAGC ACCATCCGCGGGCATGA Protein sequence : MKQDLARIEQFLDALWLERNLAENTLSAYRRDLSMVVEWLHHRGKSLATAQADDLQTLLAERVEGGYKATSSARLLSAMR RFFQYLYREKYREDDPSAQLASPKLPQRLPKDLSETQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDI SLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYATLAEIDSEK LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 9e-63 | 54 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 9e-63 | 54 |
