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Name : lysS (SBG_2634) Accession : YP_004731448.1 Strain : Salmonella bongori NCTC 12419 Genome accession: NC_015761 Putative virulence/resistance : Virulence Product : lysyl tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 2896906 - 2898423 bp Length : 1518 bp Strand : - Note : - DNA sequence : ATGTCTGAACAAAACGCACAGGGCGCTGACGAGGTAGTCGATCTTAACAATGAAATGAAGGCACGTCGCGAGAAGCTGGC TGCACTGCGTGAGCAGGGTATCCCGTTCCCGAACGATTTCCGTCGTGACCGTACCTCAGACCAGCTGCACGCTGAATTCG ACGCAAAAGAAGCTGAAGAACTGGAAGCGCTGAATATTGAAGTGTCCGTCGCGGGGCGTATGATGACCCGCCGTATCATG GGTAAAGCTTCTTTCGTTACCCTGCAGGATGTCGGCGGTCGCATTCAACTGTATGTGGCGCGCGACGATCTGCCGGAAGG TGTTTACAACGATCAGTTCAAAAAATGGGATCTTGGCGATATCCTCGGCGCGAAAGGCAAGCTGTTCAAAACGAAGACTG GCGAACTGTCTATTCACTGCACCGAGCTGCGCCTGCTGACCAAAGCGTTGCGTCCGTTGCCGGATAAGTTCCACGGCCTG CAGGATCAGGAAGCACGCTATCGTCAGCGCTATTTGGATCTCATCTCTAATGATGAATCCCGTAATACGTTCAAAACCCG TTCTAAGATCCTTGCTGGCATTCGCCAGTTCATGGTGGCTCGTGGCTTTATGGAAGTCGAAACCCCAATGATGCAGGTGA TCCCGGGCGGCGCGTCAGCACGTCCGTTTATCACCCATCACAATGCGCTGGATCTGGATATGTACCTGCGTATCGCGCCG GAACTGTACCTCAAGCGTCTGGTCGTTGGCGGCTTCGAGCGCGTATTCGAAATCAACCGTAACTTCCGCAACGAAGGCAT TTCTGTGCGCCATAACCCAGAGTTCACCATGATGGAACTCTACATGGCGTATGCGGACTATAAAGACCTGATCGAACTGA CTGAGTCTCTGTTCCGTACGCTGGCGCAGGATGTTCTGGGTACCACCCAGGTTCCGTACGGCGATGAAGTGTTTGACTTC GGCAAGCCGTTTGAAAAACTGACCATGCGTGAAGCGATCAAGAAATATCGCCCGGAAACGGACATGGCTGACCTGGACAA CTTCGATTCCGCGAAGGCGATTGCGGAAAGTATCGGCATTCACGTTGAGAAGAGCTGGGGCCTGGGCCGTATCGTCACCG AGATCTTTGACGAAGTCGCTGAAGCGCATTTGATTCAGCCGACCTTCATTACCGAATATCCGGCTGAAGTGTCTCCGTTG GCGCGTCGTAATGATGTGAACCCGGAAATCACTGACCGCTTCGAGTTCTTTATCGGCGGTCGTGAAATCGGTAACGGCTT TAGCGAGCTGAACGACGCGGAAGACCAGGCGCAGCGTTTCCTGGATCAGGTTAATGCAAAAGCGGCAGGCGACGACGAGG CCATGTTCTACGACGAAGACTACGTGACGGCGCTGGAACACGGTTTACCGCCGACAGCGGGTCTGGGAATTGGTATTGAC CGTATGGTGATGTTGTTTACTAACAGCCACACTATTCGTGATGTTATTCTGTTCCCGGCGATGCGTCCGGTCAAATAA Protein sequence : MSEQNAQGADEVVDLNNEMKARREKLAALREQGIPFPNDFRRDRTSDQLHAEFDAKEAEELEALNIEVSVAGRMMTRRIM GKASFVTLQDVGGRIQLYVARDDLPEGVYNDQFKKWDLGDILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL QDQEARYRQRYLDLISNDESRNTFKTRSKILAGIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTTQVPYGDEVFDF GKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFDEVAEAHLIQPTFITEYPAEVSPL ARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFLDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID RMVMLFTNSHTIRDVILFPAMRPVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-170 | 69 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004731448.1 | lysyl tRNA synthetase | VFG1668 | Protein | 1e-170 | 69 |
